Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20925 | 62998;62999;63000 | chr2:178588952;178588951;178588950 | chr2:179453679;179453678;179453677 |
N2AB | 19284 | 58075;58076;58077 | chr2:178588952;178588951;178588950 | chr2:179453679;179453678;179453677 |
N2A | 18357 | 55294;55295;55296 | chr2:178588952;178588951;178588950 | chr2:179453679;179453678;179453677 |
N2B | 11860 | 35803;35804;35805 | chr2:178588952;178588951;178588950 | chr2:179453679;179453678;179453677 |
Novex-1 | 11985 | 36178;36179;36180 | chr2:178588952;178588951;178588950 | chr2:179453679;179453678;179453677 |
Novex-2 | 12052 | 36379;36380;36381 | chr2:178588952;178588951;178588950 | chr2:179453679;179453678;179453677 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/E | rs755147938 | -2.252 | 0.988 | D | 0.789 | 0.632 | 0.866241633211 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/E | rs755147938 | -2.252 | 0.988 | D | 0.789 | 0.632 | 0.866241633211 | gnomAD-4.0.0 | 1.59368E-06 | None | None | None | None | N | None | 0 | 2.29116E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6812 | likely_pathogenic | 0.727 | pathogenic | -1.991 | Destabilizing | 0.826 | D | 0.681 | prob.neutral | D | 0.523431622 | None | None | N |
V/C | 0.9387 | likely_pathogenic | 0.9499 | pathogenic | -1.671 | Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
V/D | 0.9962 | likely_pathogenic | 0.9966 | pathogenic | -2.373 | Highly Destabilizing | 0.991 | D | 0.821 | deleterious | None | None | None | None | N |
V/E | 0.9868 | likely_pathogenic | 0.9885 | pathogenic | -2.121 | Highly Destabilizing | 0.988 | D | 0.789 | deleterious | D | 0.537845366 | None | None | N |
V/F | 0.7378 | likely_pathogenic | 0.7839 | pathogenic | -1.205 | Destabilizing | 0.982 | D | 0.798 | deleterious | None | None | None | None | N |
V/G | 0.9227 | likely_pathogenic | 0.9334 | pathogenic | -2.577 | Highly Destabilizing | 0.959 | D | 0.781 | deleterious | D | 0.537845366 | None | None | N |
V/H | 0.9939 | likely_pathogenic | 0.9956 | pathogenic | -2.374 | Highly Destabilizing | 0.999 | D | 0.834 | deleterious | None | None | None | None | N |
V/I | 0.0876 | likely_benign | 0.0951 | benign | -0.344 | Destabilizing | 0.704 | D | 0.639 | neutral | N | 0.514577279 | None | None | N |
V/K | 0.9897 | likely_pathogenic | 0.9918 | pathogenic | -1.669 | Destabilizing | 0.969 | D | 0.78 | deleterious | None | None | None | None | N |
V/L | 0.5327 | ambiguous | 0.5797 | pathogenic | -0.344 | Destabilizing | 0.509 | D | 0.508 | neutral | D | 0.523231261 | None | None | N |
V/M | 0.5109 | ambiguous | 0.5792 | pathogenic | -0.452 | Destabilizing | 0.373 | N | 0.411 | neutral | None | None | None | None | N |
V/N | 0.9817 | likely_pathogenic | 0.9854 | pathogenic | -2.065 | Highly Destabilizing | 0.991 | D | 0.821 | deleterious | None | None | None | None | N |
V/P | 0.9817 | likely_pathogenic | 0.9834 | pathogenic | -0.865 | Destabilizing | 0.997 | D | 0.804 | deleterious | None | None | None | None | N |
V/Q | 0.9818 | likely_pathogenic | 0.9853 | pathogenic | -1.823 | Destabilizing | 0.991 | D | 0.811 | deleterious | None | None | None | None | N |
V/R | 0.9842 | likely_pathogenic | 0.9868 | pathogenic | -1.648 | Destabilizing | 0.991 | D | 0.829 | deleterious | None | None | None | None | N |
V/S | 0.9281 | likely_pathogenic | 0.9408 | pathogenic | -2.752 | Highly Destabilizing | 0.884 | D | 0.769 | deleterious | None | None | None | None | N |
V/T | 0.8295 | likely_pathogenic | 0.8607 | pathogenic | -2.326 | Highly Destabilizing | 0.17 | N | 0.355 | neutral | None | None | None | None | N |
V/W | 0.9957 | likely_pathogenic | 0.9969 | pathogenic | -1.7 | Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | N |
V/Y | 0.9792 | likely_pathogenic | 0.9838 | pathogenic | -1.29 | Destabilizing | 0.997 | D | 0.785 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.