Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20932 | 63019;63020;63021 | chr2:178588931;178588930;178588929 | chr2:179453658;179453657;179453656 |
N2AB | 19291 | 58096;58097;58098 | chr2:178588931;178588930;178588929 | chr2:179453658;179453657;179453656 |
N2A | 18364 | 55315;55316;55317 | chr2:178588931;178588930;178588929 | chr2:179453658;179453657;179453656 |
N2B | 11867 | 35824;35825;35826 | chr2:178588931;178588930;178588929 | chr2:179453658;179453657;179453656 |
Novex-1 | 11992 | 36199;36200;36201 | chr2:178588931;178588930;178588929 | chr2:179453658;179453657;179453656 |
Novex-2 | 12059 | 36400;36401;36402 | chr2:178588931;178588930;178588929 | chr2:179453658;179453657;179453656 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/Y | None | None | 1.0 | N | 0.663 | 0.536 | 0.497547018531 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.7412 | likely_pathogenic | 0.7833 | pathogenic | -0.955 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | N |
N/C | 0.4988 | ambiguous | 0.5095 | ambiguous | -0.035 | Destabilizing | 1.0 | D | 0.644 | neutral | None | None | None | None | N |
N/D | 0.7339 | likely_pathogenic | 0.8436 | pathogenic | -0.515 | Destabilizing | 0.999 | D | 0.539 | neutral | N | 0.477116003 | None | None | N |
N/E | 0.9256 | likely_pathogenic | 0.9523 | pathogenic | -0.382 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | N |
N/F | 0.9175 | likely_pathogenic | 0.9259 | pathogenic | -0.554 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | N |
N/G | 0.6867 | likely_pathogenic | 0.7485 | pathogenic | -1.326 | Destabilizing | 0.999 | D | 0.457 | neutral | None | None | None | None | N |
N/H | 0.3266 | likely_benign | 0.3608 | ambiguous | -0.894 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | N | 0.499759755 | None | None | N |
N/I | 0.7869 | likely_pathogenic | 0.8211 | pathogenic | 0.01 | Stabilizing | 1.0 | D | 0.667 | neutral | N | 0.474647241 | None | None | N |
N/K | 0.9047 | likely_pathogenic | 0.9413 | pathogenic | -0.261 | Destabilizing | 1.0 | D | 0.667 | neutral | N | 0.469455491 | None | None | N |
N/L | 0.7229 | likely_pathogenic | 0.7906 | pathogenic | 0.01 | Stabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | N |
N/M | 0.7736 | likely_pathogenic | 0.793 | pathogenic | 0.362 | Stabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | N |
N/P | 0.9826 | likely_pathogenic | 0.986 | pathogenic | -0.282 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
N/Q | 0.8182 | likely_pathogenic | 0.8494 | pathogenic | -0.784 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
N/R | 0.868 | likely_pathogenic | 0.9076 | pathogenic | -0.329 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
N/S | 0.2117 | likely_benign | 0.2405 | benign | -0.979 | Destabilizing | 0.999 | D | 0.478 | neutral | N | 0.497852813 | None | None | N |
N/T | 0.5901 | likely_pathogenic | 0.6098 | pathogenic | -0.642 | Destabilizing | 0.999 | D | 0.634 | neutral | N | 0.428832658 | None | None | N |
N/V | 0.7508 | likely_pathogenic | 0.778 | pathogenic | -0.282 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | N |
N/W | 0.9633 | likely_pathogenic | 0.9659 | pathogenic | -0.295 | Destabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | N |
N/Y | 0.561 | ambiguous | 0.6252 | pathogenic | -0.088 | Destabilizing | 1.0 | D | 0.663 | neutral | N | 0.507083542 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.