Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20938 | 63037;63038;63039 | chr2:178588913;178588912;178588911 | chr2:179453640;179453639;179453638 |
N2AB | 19297 | 58114;58115;58116 | chr2:178588913;178588912;178588911 | chr2:179453640;179453639;179453638 |
N2A | 18370 | 55333;55334;55335 | chr2:178588913;178588912;178588911 | chr2:179453640;179453639;179453638 |
N2B | 11873 | 35842;35843;35844 | chr2:178588913;178588912;178588911 | chr2:179453640;179453639;179453638 |
Novex-1 | 11998 | 36217;36218;36219 | chr2:178588913;178588912;178588911 | chr2:179453640;179453639;179453638 |
Novex-2 | 12065 | 36418;36419;36420 | chr2:178588913;178588912;178588911 | chr2:179453640;179453639;179453638 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | None | None | 0.928 | D | 0.899 | 0.765 | 0.86557087108 | gnomAD-4.0.0 | 1.59295E-06 | None | None | None | None | N | None | 5.66187E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8218 | likely_pathogenic | 0.8264 | pathogenic | -2.619 | Highly Destabilizing | 0.645 | D | 0.622 | neutral | D | 0.547212749 | None | None | N |
V/C | 0.9438 | likely_pathogenic | 0.9484 | pathogenic | -2.06 | Highly Destabilizing | 0.995 | D | 0.743 | deleterious | None | None | None | None | N |
V/D | 0.9991 | likely_pathogenic | 0.9989 | pathogenic | -3.576 | Highly Destabilizing | 0.928 | D | 0.899 | deleterious | D | 0.632966136 | None | None | N |
V/E | 0.9969 | likely_pathogenic | 0.9961 | pathogenic | -3.268 | Highly Destabilizing | 0.945 | D | 0.864 | deleterious | None | None | None | None | N |
V/F | 0.948 | likely_pathogenic | 0.922 | pathogenic | -1.468 | Destabilizing | 0.864 | D | 0.753 | deleterious | D | 0.558569054 | None | None | N |
V/G | 0.9001 | likely_pathogenic | 0.8928 | pathogenic | -3.189 | Highly Destabilizing | 0.928 | D | 0.888 | deleterious | D | 0.632966136 | None | None | N |
V/H | 0.9992 | likely_pathogenic | 0.9989 | pathogenic | -2.993 | Highly Destabilizing | 0.995 | D | 0.874 | deleterious | None | None | None | None | N |
V/I | 0.1143 | likely_benign | 0.1106 | benign | -0.944 | Destabilizing | 0.006 | N | 0.265 | neutral | N | 0.495259252 | None | None | N |
V/K | 0.9977 | likely_pathogenic | 0.9968 | pathogenic | -2.206 | Highly Destabilizing | 0.945 | D | 0.863 | deleterious | None | None | None | None | N |
V/L | 0.6778 | likely_pathogenic | 0.6024 | pathogenic | -0.944 | Destabilizing | 0.006 | N | 0.311 | neutral | D | 0.536408967 | None | None | N |
V/M | 0.8508 | likely_pathogenic | 0.805 | pathogenic | -1.24 | Destabilizing | 0.894 | D | 0.658 | neutral | None | None | None | None | N |
V/N | 0.9961 | likely_pathogenic | 0.9954 | pathogenic | -2.867 | Highly Destabilizing | 0.981 | D | 0.911 | deleterious | None | None | None | None | N |
V/P | 0.9957 | likely_pathogenic | 0.9955 | pathogenic | -1.488 | Destabilizing | 0.981 | D | 0.88 | deleterious | None | None | None | None | N |
V/Q | 0.9959 | likely_pathogenic | 0.9946 | pathogenic | -2.53 | Highly Destabilizing | 0.981 | D | 0.897 | deleterious | None | None | None | None | N |
V/R | 0.9947 | likely_pathogenic | 0.9932 | pathogenic | -2.204 | Highly Destabilizing | 0.945 | D | 0.909 | deleterious | None | None | None | None | N |
V/S | 0.9707 | likely_pathogenic | 0.9725 | pathogenic | -3.34 | Highly Destabilizing | 0.945 | D | 0.844 | deleterious | None | None | None | None | N |
V/T | 0.9296 | likely_pathogenic | 0.9305 | pathogenic | -2.889 | Highly Destabilizing | 0.707 | D | 0.631 | neutral | None | None | None | None | N |
V/W | 0.9992 | likely_pathogenic | 0.999 | pathogenic | -2.021 | Highly Destabilizing | 0.995 | D | 0.847 | deleterious | None | None | None | None | N |
V/Y | 0.9954 | likely_pathogenic | 0.9931 | pathogenic | -1.779 | Destabilizing | 0.945 | D | 0.746 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.