Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20940 | 63043;63044;63045 | chr2:178588907;178588906;178588905 | chr2:179453634;179453633;179453632 |
N2AB | 19299 | 58120;58121;58122 | chr2:178588907;178588906;178588905 | chr2:179453634;179453633;179453632 |
N2A | 18372 | 55339;55340;55341 | chr2:178588907;178588906;178588905 | chr2:179453634;179453633;179453632 |
N2B | 11875 | 35848;35849;35850 | chr2:178588907;178588906;178588905 | chr2:179453634;179453633;179453632 |
Novex-1 | 12000 | 36223;36224;36225 | chr2:178588907;178588906;178588905 | chr2:179453634;179453633;179453632 |
Novex-2 | 12067 | 36424;36425;36426 | chr2:178588907;178588906;178588905 | chr2:179453634;179453633;179453632 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.999 | D | 0.723 | 0.534 | 0.517765160837 | gnomAD-4.0.0 | 1.59298E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86022E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8973 | likely_pathogenic | 0.9029 | pathogenic | -1.866 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
A/D | 0.9988 | likely_pathogenic | 0.9987 | pathogenic | -2.955 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
A/E | 0.9979 | likely_pathogenic | 0.9975 | pathogenic | -2.739 | Highly Destabilizing | 0.999 | D | 0.781 | deleterious | D | 0.561280263 | None | None | N |
A/F | 0.9951 | likely_pathogenic | 0.9953 | pathogenic | -0.667 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
A/G | 0.3029 | likely_benign | 0.4107 | ambiguous | -2.133 | Highly Destabilizing | 0.998 | D | 0.589 | neutral | D | 0.524057795 | None | None | N |
A/H | 0.999 | likely_pathogenic | 0.9987 | pathogenic | -1.98 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
A/I | 0.9879 | likely_pathogenic | 0.9888 | pathogenic | -0.573 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
A/K | 0.9995 | likely_pathogenic | 0.9994 | pathogenic | -1.436 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
A/L | 0.9445 | likely_pathogenic | 0.9534 | pathogenic | -0.573 | Destabilizing | 0.998 | D | 0.771 | deleterious | None | None | None | None | N |
A/M | 0.9793 | likely_pathogenic | 0.9816 | pathogenic | -1.137 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
A/N | 0.9966 | likely_pathogenic | 0.9963 | pathogenic | -1.907 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
A/P | 0.9038 | likely_pathogenic | 0.918 | pathogenic | -0.924 | Destabilizing | 0.64 | D | 0.531 | neutral | D | 0.543429497 | None | None | N |
A/Q | 0.9955 | likely_pathogenic | 0.9948 | pathogenic | -1.659 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
A/R | 0.9973 | likely_pathogenic | 0.9966 | pathogenic | -1.486 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
A/S | 0.5533 | ambiguous | 0.5105 | ambiguous | -2.24 | Highly Destabilizing | 0.998 | D | 0.602 | neutral | N | 0.502773534 | None | None | N |
A/T | 0.9244 | likely_pathogenic | 0.9216 | pathogenic | -1.921 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | D | 0.54595703 | None | None | N |
A/V | 0.9277 | likely_pathogenic | 0.935 | pathogenic | -0.924 | Destabilizing | 0.998 | D | 0.687 | prob.neutral | D | 0.536375152 | None | None | N |
A/W | 0.9994 | likely_pathogenic | 0.9993 | pathogenic | -1.283 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
A/Y | 0.998 | likely_pathogenic | 0.9979 | pathogenic | -0.997 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.