Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20941 | 63046;63047;63048 | chr2:178588904;178588903;178588902 | chr2:179453631;179453630;179453629 |
N2AB | 19300 | 58123;58124;58125 | chr2:178588904;178588903;178588902 | chr2:179453631;179453630;179453629 |
N2A | 18373 | 55342;55343;55344 | chr2:178588904;178588903;178588902 | chr2:179453631;179453630;179453629 |
N2B | 11876 | 35851;35852;35853 | chr2:178588904;178588903;178588902 | chr2:179453631;179453630;179453629 |
Novex-1 | 12001 | 36226;36227;36228 | chr2:178588904;178588903;178588902 | chr2:179453631;179453630;179453629 |
Novex-2 | 12068 | 36427;36428;36429 | chr2:178588904;178588903;178588902 | chr2:179453631;179453630;179453629 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1480131306 | -1.049 | 0.999 | N | 0.537 | 0.399 | 0.37097340754 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/K | rs1480131306 | -1.049 | 0.999 | N | 0.537 | 0.399 | 0.37097340754 | gnomAD-4.0.0 | 1.59284E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43312E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.6177 | likely_pathogenic | 0.5682 | pathogenic | -0.548 | Destabilizing | 0.999 | D | 0.672 | neutral | N | 0.468024195 | None | None | N |
E/C | 0.966 | likely_pathogenic | 0.9598 | pathogenic | -0.471 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
E/D | 0.8689 | likely_pathogenic | 0.8525 | pathogenic | -1.312 | Destabilizing | 0.999 | D | 0.461 | neutral | N | 0.513502323 | None | None | N |
E/F | 0.9854 | likely_pathogenic | 0.9835 | pathogenic | -1.023 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
E/G | 0.8046 | likely_pathogenic | 0.7756 | pathogenic | -0.84 | Destabilizing | 1.0 | D | 0.762 | deleterious | N | 0.495398068 | None | None | N |
E/H | 0.9561 | likely_pathogenic | 0.943 | pathogenic | -1.202 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
E/I | 0.772 | likely_pathogenic | 0.7669 | pathogenic | 0.223 | Stabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
E/K | 0.6726 | likely_pathogenic | 0.5979 | pathogenic | -0.523 | Destabilizing | 0.999 | D | 0.537 | neutral | N | 0.466733976 | None | None | N |
E/L | 0.9333 | likely_pathogenic | 0.9275 | pathogenic | 0.223 | Stabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
E/M | 0.8482 | likely_pathogenic | 0.8271 | pathogenic | 0.632 | Stabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
E/N | 0.9154 | likely_pathogenic | 0.8996 | pathogenic | -0.739 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/P | 0.9988 | likely_pathogenic | 0.9984 | pathogenic | -0.013 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
E/Q | 0.2896 | likely_benign | 0.259 | benign | -0.638 | Destabilizing | 1.0 | D | 0.614 | neutral | N | 0.512091547 | None | None | N |
E/R | 0.7818 | likely_pathogenic | 0.7324 | pathogenic | -0.607 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/S | 0.7528 | likely_pathogenic | 0.7174 | pathogenic | -1.146 | Destabilizing | 0.999 | D | 0.592 | neutral | None | None | None | None | N |
E/T | 0.7516 | likely_pathogenic | 0.7301 | pathogenic | -0.878 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
E/V | 0.5177 | ambiguous | 0.51 | ambiguous | -0.013 | Destabilizing | 1.0 | D | 0.825 | deleterious | N | 0.441300523 | None | None | N |
E/W | 0.9964 | likely_pathogenic | 0.9957 | pathogenic | -1.233 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
E/Y | 0.9823 | likely_pathogenic | 0.977 | pathogenic | -0.837 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.