Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20950 | 63073;63074;63075 | chr2:178588877;178588876;178588875 | chr2:179453604;179453603;179453602 |
N2AB | 19309 | 58150;58151;58152 | chr2:178588877;178588876;178588875 | chr2:179453604;179453603;179453602 |
N2A | 18382 | 55369;55370;55371 | chr2:178588877;178588876;178588875 | chr2:179453604;179453603;179453602 |
N2B | 11885 | 35878;35879;35880 | chr2:178588877;178588876;178588875 | chr2:179453604;179453603;179453602 |
Novex-1 | 12010 | 36253;36254;36255 | chr2:178588877;178588876;178588875 | chr2:179453604;179453603;179453602 |
Novex-2 | 12077 | 36454;36455;36456 | chr2:178588877;178588876;178588875 | chr2:179453604;179453603;179453602 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs748774963 | -1.138 | 0.349 | N | 0.735 | 0.072 | 0.218112801441 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.12397E-04 | None | 0 | None | 0 | 0 | 0 |
T/A | rs748774963 | -1.138 | 0.349 | N | 0.735 | 0.072 | 0.218112801441 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.94024E-04 | None | 0 | 0 | 0 | 0 | 0 |
T/A | rs748774963 | -1.138 | 0.349 | N | 0.735 | 0.072 | 0.218112801441 | gnomAD-4.0.0 | 1.28176E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.19223E-04 | None | 0 | 0 | 2.39412E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0682 | likely_benign | 0.0645 | benign | -0.992 | Destabilizing | 0.349 | N | 0.735 | prob.delet. | N | 0.461268443 | None | None | N |
T/C | 0.2419 | likely_benign | 0.2589 | benign | -0.756 | Destabilizing | 0.996 | D | 0.819 | deleterious | None | None | None | None | N |
T/D | 0.6531 | likely_pathogenic | 0.594 | pathogenic | -0.583 | Destabilizing | 0.987 | D | 0.835 | deleterious | None | None | None | None | N |
T/E | 0.3936 | ambiguous | 0.3192 | benign | -0.486 | Destabilizing | 0.961 | D | 0.841 | deleterious | None | None | None | None | N |
T/F | 0.2676 | likely_benign | 0.2767 | benign | -0.678 | Destabilizing | 0.923 | D | 0.868 | deleterious | None | None | None | None | N |
T/G | 0.2789 | likely_benign | 0.2742 | benign | -1.345 | Destabilizing | 0.961 | D | 0.841 | deleterious | None | None | None | None | N |
T/H | 0.3923 | ambiguous | 0.3719 | ambiguous | -1.489 | Destabilizing | 0.996 | D | 0.867 | deleterious | None | None | None | None | N |
T/I | 0.119 | likely_benign | 0.1128 | benign | -0.108 | Destabilizing | 0.309 | N | 0.774 | deleterious | N | 0.51248391 | None | None | N |
T/K | 0.3362 | likely_benign | 0.2675 | benign | -0.787 | Destabilizing | 0.949 | D | 0.837 | deleterious | N | 0.47733131 | None | None | N |
T/L | 0.0897 | likely_benign | 0.0876 | benign | -0.108 | Destabilizing | 0.415 | N | 0.737 | prob.delet. | None | None | None | None | N |
T/M | 0.0798 | likely_benign | 0.0801 | benign | -0.079 | Destabilizing | 0.237 | N | 0.669 | neutral | None | None | None | None | N |
T/N | 0.2384 | likely_benign | 0.2275 | benign | -0.996 | Destabilizing | 0.987 | D | 0.794 | deleterious | None | None | None | None | N |
T/P | 0.8217 | likely_pathogenic | 0.8126 | pathogenic | -0.37 | Destabilizing | 0.983 | D | 0.839 | deleterious | N | 0.478091779 | None | None | N |
T/Q | 0.2696 | likely_benign | 0.2387 | benign | -0.978 | Destabilizing | 0.961 | D | 0.832 | deleterious | None | None | None | None | N |
T/R | 0.2807 | likely_benign | 0.2254 | benign | -0.75 | Destabilizing | 0.949 | D | 0.833 | deleterious | N | 0.489105689 | None | None | N |
T/S | 0.1302 | likely_benign | 0.1322 | benign | -1.301 | Destabilizing | 0.722 | D | 0.767 | deleterious | N | 0.41518665 | None | None | N |
T/V | 0.0768 | likely_benign | 0.0753 | benign | -0.37 | Destabilizing | 0.005 | N | 0.47 | neutral | None | None | None | None | N |
T/W | 0.706 | likely_pathogenic | 0.7067 | pathogenic | -0.661 | Destabilizing | 0.996 | D | 0.864 | deleterious | None | None | None | None | N |
T/Y | 0.3871 | ambiguous | 0.3536 | ambiguous | -0.394 | Destabilizing | 0.961 | D | 0.873 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.