Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20953 | 63082;63083;63084 | chr2:178588868;178588867;178588866 | chr2:179453595;179453594;179453593 |
N2AB | 19312 | 58159;58160;58161 | chr2:178588868;178588867;178588866 | chr2:179453595;179453594;179453593 |
N2A | 18385 | 55378;55379;55380 | chr2:178588868;178588867;178588866 | chr2:179453595;179453594;179453593 |
N2B | 11888 | 35887;35888;35889 | chr2:178588868;178588867;178588866 | chr2:179453595;179453594;179453593 |
Novex-1 | 12013 | 36262;36263;36264 | chr2:178588868;178588867;178588866 | chr2:179453595;179453594;179453593 |
Novex-2 | 12080 | 36463;36464;36465 | chr2:178588868;178588867;178588866 | chr2:179453595;179453594;179453593 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs765002114 | 0.012 | 0.961 | N | 0.608 | 0.084 | 0.178374595973 | gnomAD-2.1.1 | 2.5E-05 | None | None | None | None | N | None | 8.32E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.91E-05 | 0 |
K/N | rs765002114 | 0.012 | 0.961 | N | 0.608 | 0.084 | 0.178374595973 | gnomAD-3.1.2 | 3.95E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 8.83E-05 | 0 | 0 |
K/N | rs765002114 | 0.012 | 0.961 | N | 0.608 | 0.084 | 0.178374595973 | gnomAD-4.0.0 | 1.79765E-05 | None | None | None | None | N | None | 2.67037E-05 | 0 | None | 0 | 0 | None | 0 | 1.64528E-04 | 2.11935E-05 | 0 | 1.60159E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2055 | likely_benign | 0.1734 | benign | -0.044 | Destabilizing | 0.904 | D | 0.523 | neutral | None | None | None | None | N |
K/C | 0.5515 | ambiguous | 0.4749 | ambiguous | -0.572 | Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | N |
K/D | 0.3672 | ambiguous | 0.2891 | benign | -0.324 | Destabilizing | 0.971 | D | 0.59 | neutral | None | None | None | None | N |
K/E | 0.137 | likely_benign | 0.105 | benign | -0.338 | Destabilizing | 0.877 | D | 0.595 | neutral | N | 0.395184232 | None | None | N |
K/F | 0.608 | likely_pathogenic | 0.5223 | ambiguous | -0.422 | Destabilizing | 0.985 | D | 0.773 | deleterious | None | None | None | None | N |
K/G | 0.308 | likely_benign | 0.2647 | benign | -0.152 | Destabilizing | 0.904 | D | 0.505 | neutral | None | None | None | None | N |
K/H | 0.2682 | likely_benign | 0.2432 | benign | -0.216 | Destabilizing | 0.064 | N | 0.509 | neutral | None | None | None | None | N |
K/I | 0.2633 | likely_benign | 0.1967 | benign | 0.159 | Stabilizing | 0.981 | D | 0.777 | deleterious | N | 0.519438807 | None | None | N |
K/L | 0.235 | likely_benign | 0.1833 | benign | 0.159 | Stabilizing | 0.971 | D | 0.493 | neutral | None | None | None | None | N |
K/M | 0.2057 | likely_benign | 0.157 | benign | -0.216 | Destabilizing | 0.999 | D | 0.615 | neutral | None | None | None | None | N |
K/N | 0.3044 | likely_benign | 0.2359 | benign | -0.129 | Destabilizing | 0.961 | D | 0.608 | neutral | N | 0.48165121 | None | None | N |
K/P | 0.3104 | likely_benign | 0.2657 | benign | 0.113 | Stabilizing | 0.995 | D | 0.659 | prob.neutral | None | None | None | None | N |
K/Q | 0.116 | likely_benign | 0.105 | benign | -0.246 | Destabilizing | 0.961 | D | 0.661 | prob.neutral | N | 0.479669697 | None | None | N |
K/R | 0.087 | likely_benign | 0.0861 | benign | -0.181 | Destabilizing | 0.022 | N | 0.311 | neutral | N | 0.501026405 | None | None | N |
K/S | 0.27 | likely_benign | 0.2174 | benign | -0.475 | Destabilizing | 0.904 | D | 0.581 | neutral | None | None | None | None | N |
K/T | 0.1416 | likely_benign | 0.1145 | benign | -0.378 | Destabilizing | 0.981 | D | 0.571 | neutral | N | 0.462892091 | None | None | N |
K/V | 0.2177 | likely_benign | 0.1696 | benign | 0.113 | Stabilizing | 0.985 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/W | 0.6739 | likely_pathogenic | 0.6211 | pathogenic | -0.543 | Destabilizing | 0.999 | D | 0.806 | deleterious | None | None | None | None | N |
K/Y | 0.4983 | ambiguous | 0.4239 | ambiguous | -0.193 | Destabilizing | 0.971 | D | 0.769 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.