Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20954 | 63085;63086;63087 | chr2:178588865;178588864;178588863 | chr2:179453592;179453591;179453590 |
N2AB | 19313 | 58162;58163;58164 | chr2:178588865;178588864;178588863 | chr2:179453592;179453591;179453590 |
N2A | 18386 | 55381;55382;55383 | chr2:178588865;178588864;178588863 | chr2:179453592;179453591;179453590 |
N2B | 11889 | 35890;35891;35892 | chr2:178588865;178588864;178588863 | chr2:179453592;179453591;179453590 |
Novex-1 | 12014 | 36265;36266;36267 | chr2:178588865;178588864;178588863 | chr2:179453592;179453591;179453590 |
Novex-2 | 12081 | 36466;36467;36468 | chr2:178588865;178588864;178588863 | chr2:179453592;179453591;179453590 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/Q | None | None | 1.0 | N | 0.855 | 0.398 | 0.477219869099 | gnomAD-4.0.0 | 6.84366E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9957E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0677 | likely_benign | 0.0665 | benign | -0.788 | Destabilizing | 0.999 | D | 0.796 | deleterious | N | 0.46355397 | None | None | N |
P/C | 0.5619 | ambiguous | 0.45 | ambiguous | -0.66 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
P/D | 0.7974 | likely_pathogenic | 0.6784 | pathogenic | -0.619 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
P/E | 0.5429 | ambiguous | 0.4179 | ambiguous | -0.684 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
P/F | 0.7312 | likely_pathogenic | 0.6342 | pathogenic | -0.722 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
P/G | 0.3995 | ambiguous | 0.3453 | ambiguous | -0.999 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
P/H | 0.4195 | ambiguous | 0.3192 | benign | -0.463 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
P/I | 0.4673 | ambiguous | 0.4031 | ambiguous | -0.354 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
P/K | 0.564 | ambiguous | 0.4168 | ambiguous | -0.759 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
P/L | 0.264 | likely_benign | 0.2117 | benign | -0.354 | Destabilizing | 1.0 | D | 0.807 | deleterious | N | 0.498521486 | None | None | N |
P/M | 0.4268 | ambiguous | 0.3668 | ambiguous | -0.404 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
P/N | 0.5617 | ambiguous | 0.4549 | ambiguous | -0.517 | Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
P/Q | 0.3254 | likely_benign | 0.2595 | benign | -0.723 | Destabilizing | 1.0 | D | 0.855 | deleterious | N | 0.511145239 | None | None | N |
P/R | 0.4316 | ambiguous | 0.3004 | benign | -0.207 | Destabilizing | 1.0 | D | 0.887 | deleterious | N | 0.488432628 | None | None | N |
P/S | 0.1887 | likely_benign | 0.1574 | benign | -0.914 | Destabilizing | 1.0 | D | 0.819 | deleterious | N | 0.508627168 | None | None | N |
P/T | 0.1577 | likely_benign | 0.1333 | benign | -0.875 | Destabilizing | 1.0 | D | 0.815 | deleterious | N | 0.504952144 | None | None | N |
P/V | 0.2828 | likely_benign | 0.2463 | benign | -0.463 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
P/W | 0.8592 | likely_pathogenic | 0.7713 | pathogenic | -0.844 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
P/Y | 0.6989 | likely_pathogenic | 0.571 | pathogenic | -0.557 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.