Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20958 | 63097;63098;63099 | chr2:178588853;178588852;178588851 | chr2:179453580;179453579;179453578 |
N2AB | 19317 | 58174;58175;58176 | chr2:178588853;178588852;178588851 | chr2:179453580;179453579;179453578 |
N2A | 18390 | 55393;55394;55395 | chr2:178588853;178588852;178588851 | chr2:179453580;179453579;179453578 |
N2B | 11893 | 35902;35903;35904 | chr2:178588853;178588852;178588851 | chr2:179453580;179453579;179453578 |
Novex-1 | 12018 | 36277;36278;36279 | chr2:178588853;178588852;178588851 | chr2:179453580;179453579;179453578 |
Novex-2 | 12085 | 36478;36479;36480 | chr2:178588853;178588852;178588851 | chr2:179453580;179453579;179453578 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.991 | N | 0.488 | 0.176 | 0.258283824007 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
K/R | rs2049627530 | None | 0.451 | N | 0.297 | 0.116 | 0.168933306366 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/R | rs2049627530 | None | 0.451 | N | 0.297 | 0.116 | 0.168933306366 | gnomAD-4.0.0 | 6.57635E-06 | None | None | None | None | N | None | 0 | 6.55394E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4304 | ambiguous | 0.3902 | ambiguous | -0.264 | Destabilizing | 0.997 | D | 0.553 | neutral | None | None | None | None | N |
K/C | 0.6054 | likely_pathogenic | 0.538 | ambiguous | -0.377 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
K/D | 0.8308 | likely_pathogenic | 0.8135 | pathogenic | 0.228 | Stabilizing | 0.999 | D | 0.695 | prob.delet. | None | None | None | None | N |
K/E | 0.298 | likely_benign | 0.2829 | benign | 0.265 | Stabilizing | 0.991 | D | 0.488 | neutral | N | 0.469541451 | None | None | N |
K/F | 0.8294 | likely_pathogenic | 0.7784 | pathogenic | -0.344 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
K/G | 0.5528 | ambiguous | 0.526 | ambiguous | -0.525 | Destabilizing | 0.999 | D | 0.587 | neutral | None | None | None | None | N |
K/H | 0.3651 | ambiguous | 0.3182 | benign | -0.912 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
K/I | 0.4812 | ambiguous | 0.4297 | ambiguous | 0.359 | Stabilizing | 1.0 | D | 0.823 | deleterious | N | 0.471160839 | None | None | N |
K/L | 0.5039 | ambiguous | 0.4488 | ambiguous | 0.359 | Stabilizing | 0.999 | D | 0.587 | neutral | None | None | None | None | N |
K/M | 0.3292 | likely_benign | 0.2923 | benign | 0.288 | Stabilizing | 1.0 | D | 0.685 | prob.delet. | None | None | None | None | N |
K/N | 0.6833 | likely_pathogenic | 0.6663 | pathogenic | 0.074 | Stabilizing | 0.999 | D | 0.611 | neutral | N | 0.490786032 | None | None | N |
K/P | 0.9674 | likely_pathogenic | 0.9681 | pathogenic | 0.181 | Stabilizing | 1.0 | D | 0.691 | prob.delet. | None | None | None | None | N |
K/Q | 0.1485 | likely_benign | 0.1381 | benign | -0.131 | Destabilizing | 0.997 | D | 0.63 | neutral | N | 0.472666367 | None | None | N |
K/R | 0.0787 | likely_benign | 0.0753 | benign | -0.191 | Destabilizing | 0.451 | N | 0.297 | neutral | N | 0.45567533 | None | None | N |
K/S | 0.5818 | likely_pathogenic | 0.5537 | ambiguous | -0.573 | Destabilizing | 0.997 | D | 0.599 | neutral | None | None | None | None | N |
K/T | 0.2473 | likely_benign | 0.2361 | benign | -0.361 | Destabilizing | 0.999 | D | 0.648 | neutral | N | 0.496444517 | None | None | N |
K/V | 0.3424 | ambiguous | 0.3036 | benign | 0.181 | Stabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
K/W | 0.8185 | likely_pathogenic | 0.7645 | pathogenic | -0.236 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
K/Y | 0.7491 | likely_pathogenic | 0.6894 | pathogenic | 0.1 | Stabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.