Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2096 | 6511;6512;6513 | chr2:178775578;178775577;178775576 | chr2:179640305;179640304;179640303 |
N2AB | 2096 | 6511;6512;6513 | chr2:178775578;178775577;178775576 | chr2:179640305;179640304;179640303 |
N2A | 2096 | 6511;6512;6513 | chr2:178775578;178775577;178775576 | chr2:179640305;179640304;179640303 |
N2B | 2050 | 6373;6374;6375 | chr2:178775578;178775577;178775576 | chr2:179640305;179640304;179640303 |
Novex-1 | 2050 | 6373;6374;6375 | chr2:178775578;178775577;178775576 | chr2:179640305;179640304;179640303 |
Novex-2 | 2050 | 6373;6374;6375 | chr2:178775578;178775577;178775576 | chr2:179640305;179640304;179640303 |
Novex-3 | 2096 | 6511;6512;6513 | chr2:178775578;178775577;178775576 | chr2:179640305;179640304;179640303 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | None | None | 0.031 | N | 0.323 | 0.244 | 0.212008924253 | gnomAD-4.0.0 | 1.59062E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85659E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.7027 | likely_pathogenic | 0.6732 | pathogenic | -0.322 | Destabilizing | 0.97 | D | 0.618 | neutral | None | None | None | None | N |
H/C | 0.4304 | ambiguous | 0.4221 | ambiguous | 0.531 | Stabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
H/D | 0.7836 | likely_pathogenic | 0.7529 | pathogenic | -0.47 | Destabilizing | 0.994 | D | 0.654 | neutral | N | 0.500503332 | None | None | N |
H/E | 0.7396 | likely_pathogenic | 0.7101 | pathogenic | -0.38 | Destabilizing | 0.97 | D | 0.566 | neutral | None | None | None | None | N |
H/F | 0.6462 | likely_pathogenic | 0.6074 | pathogenic | 0.886 | Stabilizing | 0.999 | D | 0.686 | prob.neutral | None | None | None | None | N |
H/G | 0.8061 | likely_pathogenic | 0.7766 | pathogenic | -0.69 | Destabilizing | 0.985 | D | 0.635 | neutral | None | None | None | None | N |
H/I | 0.6446 | likely_pathogenic | 0.6132 | pathogenic | 0.686 | Stabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | N |
H/K | 0.4597 | ambiguous | 0.4318 | ambiguous | -0.235 | Destabilizing | 0.942 | D | 0.593 | neutral | None | None | None | None | N |
H/L | 0.3187 | likely_benign | 0.2874 | benign | 0.686 | Stabilizing | 0.961 | D | 0.671 | neutral | N | 0.466850524 | None | None | N |
H/M | 0.808 | likely_pathogenic | 0.7818 | pathogenic | 0.499 | Stabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
H/N | 0.3034 | likely_benign | 0.278 | benign | -0.308 | Destabilizing | 0.98 | D | 0.572 | neutral | N | 0.495956623 | None | None | N |
H/P | 0.837 | likely_pathogenic | 0.8109 | pathogenic | 0.372 | Stabilizing | 0.998 | D | 0.711 | prob.delet. | D | 0.538691185 | None | None | N |
H/Q | 0.4081 | ambiguous | 0.403 | ambiguous | -0.064 | Destabilizing | 0.989 | D | 0.593 | neutral | N | 0.458389956 | None | None | N |
H/R | 0.1487 | likely_benign | 0.1465 | benign | -0.967 | Destabilizing | 0.031 | N | 0.323 | neutral | N | 0.341734738 | None | None | N |
H/S | 0.5684 | likely_pathogenic | 0.5331 | ambiguous | -0.175 | Destabilizing | 0.985 | D | 0.601 | neutral | None | None | None | None | N |
H/T | 0.598 | likely_pathogenic | 0.565 | pathogenic | 0.018 | Stabilizing | 0.996 | D | 0.675 | neutral | None | None | None | None | N |
H/V | 0.5502 | ambiguous | 0.5133 | ambiguous | 0.372 | Stabilizing | 0.996 | D | 0.719 | prob.delet. | None | None | None | None | N |
H/W | 0.7103 | likely_pathogenic | 0.6773 | pathogenic | 1.072 | Stabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
H/Y | 0.2637 | likely_benign | 0.2337 | benign | 1.175 | Stabilizing | 0.998 | D | 0.601 | neutral | N | 0.503918272 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.