Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20965 | 63118;63119;63120 | chr2:178588832;178588831;178588830 | chr2:179453559;179453558;179453557 |
N2AB | 19324 | 58195;58196;58197 | chr2:178588832;178588831;178588830 | chr2:179453559;179453558;179453557 |
N2A | 18397 | 55414;55415;55416 | chr2:178588832;178588831;178588830 | chr2:179453559;179453558;179453557 |
N2B | 11900 | 35923;35924;35925 | chr2:178588832;178588831;178588830 | chr2:179453559;179453558;179453557 |
Novex-1 | 12025 | 36298;36299;36300 | chr2:178588832;178588831;178588830 | chr2:179453559;179453558;179453557 |
Novex-2 | 12092 | 36499;36500;36501 | chr2:178588832;178588831;178588830 | chr2:179453559;179453558;179453557 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | None | None | 1.0 | N | 0.749 | 0.351 | 0.32714864917 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
G/S | rs753424257 | None | 1.0 | N | 0.725 | 0.395 | 0.32714864917 | gnomAD-4.0.0 | 7.528E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99585E-06 | 0 | 1.657E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3278 | likely_benign | 0.2914 | benign | -0.824 | Destabilizing | 1.0 | D | 0.62 | neutral | N | 0.489762528 | None | None | N |
G/C | 0.5134 | ambiguous | 0.4619 | ambiguous | -1.095 | Destabilizing | 1.0 | D | 0.765 | deleterious | N | 0.509894699 | None | None | N |
G/D | 0.535 | ambiguous | 0.49 | ambiguous | -1.685 | Destabilizing | 1.0 | D | 0.749 | deleterious | N | 0.468238005 | None | None | N |
G/E | 0.6815 | likely_pathogenic | 0.6086 | pathogenic | -1.726 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
G/F | 0.8971 | likely_pathogenic | 0.8863 | pathogenic | -1.092 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
G/H | 0.7897 | likely_pathogenic | 0.7579 | pathogenic | -1.422 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
G/I | 0.8944 | likely_pathogenic | 0.8419 | pathogenic | -0.406 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
G/K | 0.8472 | likely_pathogenic | 0.7902 | pathogenic | -1.297 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
G/L | 0.8295 | likely_pathogenic | 0.7853 | pathogenic | -0.406 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
G/M | 0.877 | likely_pathogenic | 0.8399 | pathogenic | -0.41 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
G/N | 0.6976 | likely_pathogenic | 0.6498 | pathogenic | -1.044 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
G/P | 0.9861 | likely_pathogenic | 0.9839 | pathogenic | -0.505 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
G/Q | 0.709 | likely_pathogenic | 0.646 | pathogenic | -1.244 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
G/R | 0.7562 | likely_pathogenic | 0.7005 | pathogenic | -1.007 | Destabilizing | 1.0 | D | 0.795 | deleterious | N | 0.497524436 | None | None | N |
G/S | 0.1798 | likely_benign | 0.1684 | benign | -1.267 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | N | 0.476045457 | None | None | N |
G/T | 0.5517 | ambiguous | 0.5021 | ambiguous | -1.24 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
G/V | 0.8074 | likely_pathogenic | 0.7454 | pathogenic | -0.505 | Destabilizing | 1.0 | D | 0.78 | deleterious | N | 0.50938772 | None | None | N |
G/W | 0.8172 | likely_pathogenic | 0.8066 | pathogenic | -1.462 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
G/Y | 0.8205 | likely_pathogenic | 0.7845 | pathogenic | -1.055 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.