Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20971 | 63136;63137;63138 | chr2:178588814;178588813;178588812 | chr2:179453541;179453540;179453539 |
N2AB | 19330 | 58213;58214;58215 | chr2:178588814;178588813;178588812 | chr2:179453541;179453540;179453539 |
N2A | 18403 | 55432;55433;55434 | chr2:178588814;178588813;178588812 | chr2:179453541;179453540;179453539 |
N2B | 11906 | 35941;35942;35943 | chr2:178588814;178588813;178588812 | chr2:179453541;179453540;179453539 |
Novex-1 | 12031 | 36316;36317;36318 | chr2:178588814;178588813;178588812 | chr2:179453541;179453540;179453539 |
Novex-2 | 12098 | 36517;36518;36519 | chr2:178588814;178588813;178588812 | chr2:179453541;179453540;179453539 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.864 | N | 0.702 | 0.187 | 0.328486982098 | gnomAD-4.0.0 | 5.47497E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19673E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2086 | likely_benign | 0.1969 | benign | -0.536 | Destabilizing | 0.645 | D | 0.64 | neutral | N | 0.516902721 | None | None | N |
E/C | 0.8297 | likely_pathogenic | 0.8075 | pathogenic | -0.143 | Destabilizing | 0.995 | D | 0.753 | deleterious | None | None | None | None | N |
E/D | 0.1672 | likely_benign | 0.1366 | benign | -0.702 | Destabilizing | 0.002 | N | 0.248 | neutral | D | 0.523540692 | None | None | N |
E/F | 0.7573 | likely_pathogenic | 0.7111 | pathogenic | -0.285 | Destabilizing | 0.995 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/G | 0.4036 | ambiguous | 0.3711 | ambiguous | -0.804 | Destabilizing | 0.645 | D | 0.637 | neutral | N | 0.510150107 | None | None | N |
E/H | 0.532 | ambiguous | 0.4805 | ambiguous | -0.393 | Destabilizing | 0.985 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/I | 0.2577 | likely_benign | 0.232 | benign | 0.162 | Stabilizing | 0.945 | D | 0.743 | deleterious | None | None | None | None | N |
E/K | 0.2436 | likely_benign | 0.2272 | benign | 0.024 | Stabilizing | 0.645 | D | 0.589 | neutral | N | 0.486905101 | None | None | N |
E/L | 0.3815 | ambiguous | 0.351 | ambiguous | 0.162 | Stabilizing | 0.945 | D | 0.741 | deleterious | None | None | None | None | N |
E/M | 0.4256 | ambiguous | 0.3967 | ambiguous | 0.38 | Stabilizing | 0.995 | D | 0.745 | deleterious | None | None | None | None | N |
E/N | 0.3288 | likely_benign | 0.2808 | benign | -0.347 | Destabilizing | 0.809 | D | 0.71 | prob.delet. | None | None | None | None | N |
E/P | 0.9657 | likely_pathogenic | 0.9472 | pathogenic | -0.049 | Destabilizing | 0.945 | D | 0.768 | deleterious | None | None | None | None | N |
E/Q | 0.1635 | likely_benign | 0.1644 | benign | -0.29 | Destabilizing | 0.864 | D | 0.702 | prob.neutral | N | 0.473669232 | None | None | N |
E/R | 0.3749 | ambiguous | 0.3336 | benign | 0.193 | Stabilizing | 0.894 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/S | 0.2599 | likely_benign | 0.2375 | benign | -0.535 | Destabilizing | 0.547 | D | 0.596 | neutral | None | None | None | None | N |
E/T | 0.2257 | likely_benign | 0.2118 | benign | -0.319 | Destabilizing | 0.894 | D | 0.733 | prob.delet. | None | None | None | None | N |
E/V | 0.1557 | likely_benign | 0.149 | benign | -0.049 | Destabilizing | 0.928 | D | 0.741 | deleterious | N | 0.502453344 | None | None | N |
E/W | 0.9161 | likely_pathogenic | 0.8945 | pathogenic | -0.096 | Destabilizing | 0.995 | D | 0.754 | deleterious | None | None | None | None | N |
E/Y | 0.6545 | likely_pathogenic | 0.5956 | pathogenic | -0.034 | Destabilizing | 0.995 | D | 0.749 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.