Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20979 | 63160;63161;63162 | chr2:178588790;178588789;178588788 | chr2:179453517;179453516;179453515 |
N2AB | 19338 | 58237;58238;58239 | chr2:178588790;178588789;178588788 | chr2:179453517;179453516;179453515 |
N2A | 18411 | 55456;55457;55458 | chr2:178588790;178588789;178588788 | chr2:179453517;179453516;179453515 |
N2B | 11914 | 35965;35966;35967 | chr2:178588790;178588789;178588788 | chr2:179453517;179453516;179453515 |
Novex-1 | 12039 | 36340;36341;36342 | chr2:178588790;178588789;178588788 | chr2:179453517;179453516;179453515 |
Novex-2 | 12106 | 36541;36542;36543 | chr2:178588790;178588789;178588788 | chr2:179453517;179453516;179453515 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs375728230 | -1.029 | 0.999 | N | 0.701 | 0.376 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.47E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/A | rs375728230 | -1.029 | 0.999 | N | 0.701 | 0.376 | None | gnomAD-4.0.0 | 1.36917E-06 | None | None | None | None | N | None | 2.99007E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65766E-05 |
E/D | None | None | 0.999 | N | 0.563 | 0.203 | 0.28722502521 | gnomAD-4.0.0 | 2.05318E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.7992E-06 | 0 | 1.657E-05 |
E/G | rs375728230 | -1.398 | 1.0 | N | 0.76 | 0.385 | 0.35139820857 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
E/G | rs375728230 | -1.398 | 1.0 | N | 0.76 | 0.385 | 0.35139820857 | gnomAD-4.0.0 | 6.84584E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99902E-07 | 0 | 0 |
E/K | None | None | 0.999 | N | 0.596 | 0.366 | 0.32053947749 | gnomAD-4.0.0 | 6.84585E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99909E-07 | 0 | 0 |
E/Q | rs1306891128 | -0.907 | 1.0 | N | 0.657 | 0.273 | 0.286081765059 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.6E-05 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs1306891128 | -0.907 | 1.0 | N | 0.657 | 0.273 | 0.286081765059 | gnomAD-4.0.0 | 6.84585E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52551E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2389 | likely_benign | 0.1729 | benign | -0.737 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | N | 0.447946855 | None | None | N |
E/C | 0.8743 | likely_pathogenic | 0.7987 | pathogenic | -0.463 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
E/D | 0.2391 | likely_benign | 0.1792 | benign | -1.329 | Destabilizing | 0.999 | D | 0.563 | neutral | N | 0.493449858 | None | None | N |
E/F | 0.805 | likely_pathogenic | 0.7078 | pathogenic | -0.747 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
E/G | 0.2738 | likely_benign | 0.1896 | benign | -1.065 | Destabilizing | 1.0 | D | 0.76 | deleterious | N | 0.427995657 | None | None | N |
E/H | 0.7335 | likely_pathogenic | 0.55 | ambiguous | -1.131 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | N |
E/I | 0.6036 | likely_pathogenic | 0.4575 | ambiguous | 0.142 | Stabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
E/K | 0.5982 | likely_pathogenic | 0.3838 | ambiguous | -0.741 | Destabilizing | 0.999 | D | 0.596 | neutral | N | 0.48719589 | None | None | N |
E/L | 0.6809 | likely_pathogenic | 0.5411 | ambiguous | 0.142 | Stabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
E/M | 0.5817 | likely_pathogenic | 0.455 | ambiguous | 0.626 | Stabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | N |
E/N | 0.4267 | ambiguous | 0.2924 | benign | -0.995 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/P | 0.9933 | likely_pathogenic | 0.9822 | pathogenic | -0.129 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
E/Q | 0.2944 | likely_benign | 0.2024 | benign | -0.901 | Destabilizing | 1.0 | D | 0.657 | neutral | N | 0.47740297 | None | None | N |
E/R | 0.7432 | likely_pathogenic | 0.5339 | ambiguous | -0.671 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/S | 0.2859 | likely_benign | 0.1918 | benign | -1.344 | Destabilizing | 0.999 | D | 0.643 | neutral | None | None | None | None | N |
E/T | 0.3217 | likely_benign | 0.2179 | benign | -1.075 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
E/V | 0.3796 | ambiguous | 0.2857 | benign | -0.129 | Destabilizing | 1.0 | D | 0.795 | deleterious | N | 0.480059273 | None | None | N |
E/W | 0.9474 | likely_pathogenic | 0.8987 | pathogenic | -0.739 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
E/Y | 0.717 | likely_pathogenic | 0.5836 | pathogenic | -0.546 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.