Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20981 | 63166;63167;63168 | chr2:178588784;178588783;178588782 | chr2:179453511;179453510;179453509 |
N2AB | 19340 | 58243;58244;58245 | chr2:178588784;178588783;178588782 | chr2:179453511;179453510;179453509 |
N2A | 18413 | 55462;55463;55464 | chr2:178588784;178588783;178588782 | chr2:179453511;179453510;179453509 |
N2B | 11916 | 35971;35972;35973 | chr2:178588784;178588783;178588782 | chr2:179453511;179453510;179453509 |
Novex-1 | 12041 | 36346;36347;36348 | chr2:178588784;178588783;178588782 | chr2:179453511;179453510;179453509 |
Novex-2 | 12108 | 36547;36548;36549 | chr2:178588784;178588783;178588782 | chr2:179453511;179453510;179453509 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | rs1412315320 | None | 1.0 | N | 0.793 | 0.548 | 0.518421792786 | gnomAD-4.0.0 | 1.36876E-06 | None | None | None | None | N | None | 0 | 0 | None | 3.82995E-05 | 0 | None | 0 | 0 | 8.99588E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2672 | likely_benign | 0.2351 | benign | -1.01 | Destabilizing | 0.999 | D | 0.512 | neutral | N | 0.501936056 | None | None | N |
T/C | 0.7488 | likely_pathogenic | 0.6642 | pathogenic | -1.012 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
T/D | 0.8928 | likely_pathogenic | 0.8255 | pathogenic | -1.722 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
T/E | 0.7996 | likely_pathogenic | 0.6906 | pathogenic | -1.587 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
T/F | 0.5972 | likely_pathogenic | 0.493 | ambiguous | -0.618 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
T/G | 0.7624 | likely_pathogenic | 0.6964 | pathogenic | -1.373 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
T/H | 0.7368 | likely_pathogenic | 0.6387 | pathogenic | -1.6 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
T/I | 0.2778 | likely_benign | 0.2113 | benign | -0.085 | Destabilizing | 1.0 | D | 0.783 | deleterious | N | 0.47390368 | None | None | N |
T/K | 0.8308 | likely_pathogenic | 0.7461 | pathogenic | -1.054 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
T/L | 0.1936 | likely_benign | 0.1494 | benign | -0.085 | Destabilizing | 0.999 | D | 0.642 | neutral | None | None | None | None | N |
T/M | 0.116 | likely_benign | 0.0989 | benign | -0.115 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
T/N | 0.4676 | ambiguous | 0.3763 | ambiguous | -1.505 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | N | 0.518540304 | None | None | N |
T/P | 0.8785 | likely_pathogenic | 0.8768 | pathogenic | -0.361 | Destabilizing | 1.0 | D | 0.793 | deleterious | N | 0.506188624 | None | None | N |
T/Q | 0.6828 | likely_pathogenic | 0.6088 | pathogenic | -1.415 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
T/R | 0.7767 | likely_pathogenic | 0.6811 | pathogenic | -1.073 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
T/S | 0.4067 | ambiguous | 0.3283 | benign | -1.614 | Destabilizing | 0.999 | D | 0.483 | neutral | N | 0.478731122 | None | None | N |
T/V | 0.1934 | likely_benign | 0.1606 | benign | -0.361 | Destabilizing | 0.999 | D | 0.532 | neutral | None | None | None | None | N |
T/W | 0.8435 | likely_pathogenic | 0.7594 | pathogenic | -0.771 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
T/Y | 0.6746 | likely_pathogenic | 0.5425 | ambiguous | -0.443 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.