Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20982 | 63169;63170;63171 | chr2:178588781;178588780;178588779 | chr2:179453508;179453507;179453506 |
N2AB | 19341 | 58246;58247;58248 | chr2:178588781;178588780;178588779 | chr2:179453508;179453507;179453506 |
N2A | 18414 | 55465;55466;55467 | chr2:178588781;178588780;178588779 | chr2:179453508;179453507;179453506 |
N2B | 11917 | 35974;35975;35976 | chr2:178588781;178588780;178588779 | chr2:179453508;179453507;179453506 |
Novex-1 | 12042 | 36349;36350;36351 | chr2:178588781;178588780;178588779 | chr2:179453508;179453507;179453506 |
Novex-2 | 12109 | 36550;36551;36552 | chr2:178588781;178588780;178588779 | chr2:179453508;179453507;179453506 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.997 | N | 0.691 | 0.352 | 0.461495907335 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8185 | likely_pathogenic | 0.7682 | pathogenic | -2.301 | Highly Destabilizing | 0.999 | D | 0.696 | prob.neutral | N | 0.483160071 | None | None | N |
V/C | 0.9703 | likely_pathogenic | 0.9619 | pathogenic | -1.872 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
V/D | 0.9996 | likely_pathogenic | 0.9993 | pathogenic | -3.406 | Highly Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
V/E | 0.998 | likely_pathogenic | 0.9972 | pathogenic | -3.093 | Highly Destabilizing | 1.0 | D | 0.798 | deleterious | N | 0.518242946 | None | None | N |
V/F | 0.9623 | likely_pathogenic | 0.9456 | pathogenic | -1.308 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
V/G | 0.9775 | likely_pathogenic | 0.9641 | pathogenic | -2.917 | Highly Destabilizing | 1.0 | D | 0.814 | deleterious | N | 0.495530335 | None | None | N |
V/H | 0.9996 | likely_pathogenic | 0.9993 | pathogenic | -2.889 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
V/I | 0.1024 | likely_benign | 0.1007 | benign | -0.518 | Destabilizing | 0.998 | D | 0.559 | neutral | None | None | None | None | N |
V/K | 0.9986 | likely_pathogenic | 0.9979 | pathogenic | -1.985 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
V/L | 0.449 | ambiguous | 0.3635 | ambiguous | -0.518 | Destabilizing | 0.997 | D | 0.691 | prob.neutral | N | 0.39119699 | None | None | N |
V/M | 0.7492 | likely_pathogenic | 0.674 | pathogenic | -0.765 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | N | 0.481185062 | None | None | N |
V/N | 0.9982 | likely_pathogenic | 0.9973 | pathogenic | -2.643 | Highly Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
V/P | 0.9982 | likely_pathogenic | 0.9966 | pathogenic | -1.093 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
V/Q | 0.998 | likely_pathogenic | 0.997 | pathogenic | -2.298 | Highly Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
V/R | 0.997 | likely_pathogenic | 0.9954 | pathogenic | -2.049 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
V/S | 0.9875 | likely_pathogenic | 0.9809 | pathogenic | -3.167 | Highly Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
V/T | 0.923 | likely_pathogenic | 0.899 | pathogenic | -2.693 | Highly Destabilizing | 0.999 | D | 0.676 | prob.neutral | None | None | None | None | N |
V/W | 0.9997 | likely_pathogenic | 0.9995 | pathogenic | -1.962 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
V/Y | 0.9981 | likely_pathogenic | 0.9971 | pathogenic | -1.59 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.