Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20983 | 63172;63173;63174 | chr2:178588778;178588777;178588776 | chr2:179453505;179453504;179453503 |
N2AB | 19342 | 58249;58250;58251 | chr2:178588778;178588777;178588776 | chr2:179453505;179453504;179453503 |
N2A | 18415 | 55468;55469;55470 | chr2:178588778;178588777;178588776 | chr2:179453505;179453504;179453503 |
N2B | 11918 | 35977;35978;35979 | chr2:178588778;178588777;178588776 | chr2:179453505;179453504;179453503 |
Novex-1 | 12043 | 36352;36353;36354 | chr2:178588778;178588777;178588776 | chr2:179453505;179453504;179453503 |
Novex-2 | 12110 | 36553;36554;36555 | chr2:178588778;178588777;178588776 | chr2:179453505;179453504;179453503 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 1.0 | N | 0.849 | 0.43 | 0.763021800361 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/L | rs878904625 | -0.193 | 0.997 | N | 0.592 | 0.358 | 0.615873902259 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2846 | likely_benign | 0.2301 | benign | -1.83 | Destabilizing | 0.999 | D | 0.608 | neutral | N | 0.393592295 | None | None | N |
V/C | 0.653 | likely_pathogenic | 0.6415 | pathogenic | -1.314 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
V/D | 0.7643 | likely_pathogenic | 0.7057 | pathogenic | -2.396 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | N | 0.463876313 | None | None | N |
V/E | 0.593 | likely_pathogenic | 0.5318 | ambiguous | -2.263 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
V/F | 0.2682 | likely_benign | 0.2417 | benign | -1.135 | Destabilizing | 1.0 | D | 0.891 | deleterious | N | 0.49177499 | None | None | N |
V/G | 0.4074 | ambiguous | 0.3265 | benign | -2.273 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | N | 0.435324274 | None | None | N |
V/H | 0.7577 | likely_pathogenic | 0.7016 | pathogenic | -2.044 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
V/I | 0.0883 | likely_benign | 0.0794 | benign | -0.637 | Destabilizing | 0.997 | D | 0.539 | neutral | N | 0.473189229 | None | None | N |
V/K | 0.6924 | likely_pathogenic | 0.6276 | pathogenic | -1.616 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
V/L | 0.2868 | likely_benign | 0.2289 | benign | -0.637 | Destabilizing | 0.997 | D | 0.592 | neutral | N | 0.444039758 | None | None | N |
V/M | 0.1805 | likely_benign | 0.156 | benign | -0.619 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
V/N | 0.4862 | ambiguous | 0.403 | ambiguous | -1.7 | Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
V/P | 0.9831 | likely_pathogenic | 0.9747 | pathogenic | -1.005 | Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
V/Q | 0.5119 | ambiguous | 0.451 | ambiguous | -1.687 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
V/R | 0.6197 | likely_pathogenic | 0.5542 | ambiguous | -1.286 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
V/S | 0.2744 | likely_benign | 0.2203 | benign | -2.224 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
V/T | 0.228 | likely_benign | 0.1687 | benign | -1.977 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | N |
V/W | 0.8987 | likely_pathogenic | 0.8805 | pathogenic | -1.608 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
V/Y | 0.6718 | likely_pathogenic | 0.6347 | pathogenic | -1.237 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.