Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20994 | 63205;63206;63207 | chr2:178588745;178588744;178588743 | chr2:179453472;179453471;179453470 |
N2AB | 19353 | 58282;58283;58284 | chr2:178588745;178588744;178588743 | chr2:179453472;179453471;179453470 |
N2A | 18426 | 55501;55502;55503 | chr2:178588745;178588744;178588743 | chr2:179453472;179453471;179453470 |
N2B | 11929 | 36010;36011;36012 | chr2:178588745;178588744;178588743 | chr2:179453472;179453471;179453470 |
Novex-1 | 12054 | 36385;36386;36387 | chr2:178588745;178588744;178588743 | chr2:179453472;179453471;179453470 |
Novex-2 | 12121 | 36586;36587;36588 | chr2:178588745;178588744;178588743 | chr2:179453472;179453471;179453470 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | None | None | 0.543 | N | 0.261 | 0.111 | 0.134241683229 | gnomAD-4.0.0 | 1.59224E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4334E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0817 | likely_benign | 0.0784 | benign | -0.339 | Destabilizing | 0.973 | D | 0.421 | neutral | N | 0.428302302 | None | None | N |
S/C | 0.1201 | likely_benign | 0.1217 | benign | -0.228 | Destabilizing | 1.0 | D | 0.597 | neutral | N | 0.518385588 | None | None | N |
S/D | 0.3833 | ambiguous | 0.3472 | ambiguous | 0.006 | Stabilizing | 0.996 | D | 0.559 | neutral | None | None | None | None | N |
S/E | 0.4341 | ambiguous | 0.4038 | ambiguous | -0.09 | Destabilizing | 0.996 | D | 0.543 | neutral | None | None | None | None | N |
S/F | 0.3094 | likely_benign | 0.2981 | benign | -0.915 | Destabilizing | 0.999 | D | 0.671 | neutral | N | 0.507168517 | None | None | N |
S/G | 0.104 | likely_benign | 0.098 | benign | -0.454 | Destabilizing | 0.996 | D | 0.452 | neutral | None | None | None | None | N |
S/H | 0.3531 | ambiguous | 0.3397 | benign | -0.97 | Destabilizing | 1.0 | D | 0.597 | neutral | None | None | None | None | N |
S/I | 0.1814 | likely_benign | 0.1812 | benign | -0.167 | Destabilizing | 0.998 | D | 0.683 | prob.neutral | None | None | None | None | N |
S/K | 0.5883 | likely_pathogenic | 0.5754 | pathogenic | -0.534 | Destabilizing | 0.996 | D | 0.553 | neutral | None | None | None | None | N |
S/L | 0.123 | likely_benign | 0.117 | benign | -0.167 | Destabilizing | 0.992 | D | 0.561 | neutral | None | None | None | None | N |
S/M | 0.1744 | likely_benign | 0.174 | benign | 0.107 | Stabilizing | 1.0 | D | 0.596 | neutral | None | None | None | None | N |
S/N | 0.1291 | likely_benign | 0.121 | benign | -0.222 | Destabilizing | 0.996 | D | 0.546 | neutral | None | None | None | None | N |
S/P | 0.0992 | likely_benign | 0.0853 | benign | -0.196 | Destabilizing | 0.999 | D | 0.661 | neutral | N | 0.325769793 | None | None | N |
S/Q | 0.4119 | ambiguous | 0.396 | ambiguous | -0.493 | Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | N |
S/R | 0.5799 | likely_pathogenic | 0.5716 | pathogenic | -0.3 | Destabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | N |
S/T | 0.0906 | likely_benign | 0.0882 | benign | -0.319 | Destabilizing | 0.543 | D | 0.261 | neutral | N | 0.468167412 | None | None | N |
S/V | 0.1833 | likely_benign | 0.1809 | benign | -0.196 | Destabilizing | 0.998 | D | 0.574 | neutral | None | None | None | None | N |
S/W | 0.3938 | ambiguous | 0.3944 | ambiguous | -0.929 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
S/Y | 0.2288 | likely_benign | 0.2188 | benign | -0.652 | Destabilizing | 0.999 | D | 0.661 | neutral | N | 0.518038872 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.