Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20995 | 63208;63209;63210 | chr2:178588742;178588741;178588740 | chr2:179453469;179453468;179453467 |
N2AB | 19354 | 58285;58286;58287 | chr2:178588742;178588741;178588740 | chr2:179453469;179453468;179453467 |
N2A | 18427 | 55504;55505;55506 | chr2:178588742;178588741;178588740 | chr2:179453469;179453468;179453467 |
N2B | 11930 | 36013;36014;36015 | chr2:178588742;178588741;178588740 | chr2:179453469;179453468;179453467 |
Novex-1 | 12055 | 36388;36389;36390 | chr2:178588742;178588741;178588740 | chr2:179453469;179453468;179453467 |
Novex-2 | 12122 | 36589;36590;36591 | chr2:178588742;178588741;178588740 | chr2:179453469;179453468;179453467 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1275723419 | None | 0.822 | N | 0.779 | 0.492 | 0.712447893199 | gnomAD-4.0.0 | 1.30036E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.70928E-05 | 0 | 0 |
I/V | rs1322917551 | -1.512 | 0.006 | N | 0.241 | 0.123 | 0.469333501611 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 6.5189E-04 | None | 0 | None | 0 | 0 | 0 |
I/V | rs1322917551 | -1.512 | 0.006 | N | 0.241 | 0.123 | 0.469333501611 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93949E-04 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs1322917551 | -1.512 | 0.006 | N | 0.241 | 0.123 | 0.469333501611 | gnomAD-4.0.0 | 6.57661E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.93949E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9675 | likely_pathogenic | 0.9576 | pathogenic | -2.075 | Highly Destabilizing | 0.754 | D | 0.652 | neutral | None | None | None | None | N |
I/C | 0.9753 | likely_pathogenic | 0.9705 | pathogenic | -1.176 | Destabilizing | 0.998 | D | 0.755 | deleterious | None | None | None | None | N |
I/D | 0.9989 | likely_pathogenic | 0.9985 | pathogenic | -1.568 | Destabilizing | 0.993 | D | 0.843 | deleterious | None | None | None | None | N |
I/E | 0.9958 | likely_pathogenic | 0.9942 | pathogenic | -1.542 | Destabilizing | 0.978 | D | 0.834 | deleterious | None | None | None | None | N |
I/F | 0.9226 | likely_pathogenic | 0.9234 | pathogenic | -1.557 | Destabilizing | 0.956 | D | 0.738 | prob.delet. | None | None | None | None | N |
I/G | 0.9966 | likely_pathogenic | 0.9961 | pathogenic | -2.438 | Highly Destabilizing | 0.978 | D | 0.832 | deleterious | None | None | None | None | N |
I/H | 0.9964 | likely_pathogenic | 0.9956 | pathogenic | -1.626 | Destabilizing | 0.998 | D | 0.809 | deleterious | None | None | None | None | N |
I/K | 0.9888 | likely_pathogenic | 0.9863 | pathogenic | -1.375 | Destabilizing | 0.971 | D | 0.832 | deleterious | D | 0.53499821 | None | None | N |
I/L | 0.4406 | ambiguous | 0.485 | ambiguous | -1.124 | Destabilizing | 0.294 | N | 0.447 | neutral | N | 0.478275454 | None | None | N |
I/M | 0.6129 | likely_pathogenic | 0.6051 | pathogenic | -0.753 | Destabilizing | 0.942 | D | 0.706 | prob.neutral | D | 0.527236302 | None | None | N |
I/N | 0.9788 | likely_pathogenic | 0.9728 | pathogenic | -1.201 | Destabilizing | 0.993 | D | 0.84 | deleterious | None | None | None | None | N |
I/P | 0.9698 | likely_pathogenic | 0.9535 | pathogenic | -1.412 | Destabilizing | 0.993 | D | 0.842 | deleterious | None | None | None | None | N |
I/Q | 0.9937 | likely_pathogenic | 0.9915 | pathogenic | -1.378 | Destabilizing | 0.993 | D | 0.839 | deleterious | None | None | None | None | N |
I/R | 0.9851 | likely_pathogenic | 0.98 | pathogenic | -0.742 | Destabilizing | 0.971 | D | 0.841 | deleterious | D | 0.546354515 | None | None | N |
I/S | 0.9809 | likely_pathogenic | 0.973 | pathogenic | -1.857 | Destabilizing | 0.956 | D | 0.806 | deleterious | None | None | None | None | N |
I/T | 0.9536 | likely_pathogenic | 0.937 | pathogenic | -1.709 | Destabilizing | 0.822 | D | 0.779 | deleterious | N | 0.513664724 | None | None | N |
I/V | 0.0877 | likely_benign | 0.0942 | benign | -1.412 | Destabilizing | 0.006 | N | 0.241 | neutral | N | 0.4705385 | None | None | N |
I/W | 0.9981 | likely_pathogenic | 0.9982 | pathogenic | -1.647 | Destabilizing | 0.998 | D | 0.771 | deleterious | None | None | None | None | N |
I/Y | 0.9903 | likely_pathogenic | 0.9888 | pathogenic | -1.437 | Destabilizing | 0.978 | D | 0.804 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.