Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2100 | 6523;6524;6525 | chr2:178775566;178775565;178775564 | chr2:179640293;179640292;179640291 |
N2AB | 2100 | 6523;6524;6525 | chr2:178775566;178775565;178775564 | chr2:179640293;179640292;179640291 |
N2A | 2100 | 6523;6524;6525 | chr2:178775566;178775565;178775564 | chr2:179640293;179640292;179640291 |
N2B | 2054 | 6385;6386;6387 | chr2:178775566;178775565;178775564 | chr2:179640293;179640292;179640291 |
Novex-1 | 2054 | 6385;6386;6387 | chr2:178775566;178775565;178775564 | chr2:179640293;179640292;179640291 |
Novex-2 | 2054 | 6385;6386;6387 | chr2:178775566;178775565;178775564 | chr2:179640293;179640292;179640291 |
Novex-3 | 2100 | 6523;6524;6525 | chr2:178775566;178775565;178775564 | chr2:179640293;179640292;179640291 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/I | None | None | 1.0 | D | 0.769 | 0.59 | 0.761427779387 | gnomAD-4.0.0 | 1.59069E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.775E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9184 | likely_pathogenic | 0.9256 | pathogenic | -1.47 | Destabilizing | 0.999 | D | 0.599 | neutral | None | None | None | None | N |
R/C | 0.6569 | likely_pathogenic | 0.6719 | pathogenic | -1.57 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
R/D | 0.9848 | likely_pathogenic | 0.9862 | pathogenic | -0.616 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
R/E | 0.8928 | likely_pathogenic | 0.903 | pathogenic | -0.427 | Destabilizing | 0.999 | D | 0.584 | neutral | None | None | None | None | N |
R/F | 0.9601 | likely_pathogenic | 0.9622 | pathogenic | -0.876 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
R/G | 0.8938 | likely_pathogenic | 0.9046 | pathogenic | -1.815 | Destabilizing | 1.0 | D | 0.745 | deleterious | D | 0.561514846 | None | None | N |
R/H | 0.345 | ambiguous | 0.3776 | ambiguous | -1.801 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
R/I | 0.8578 | likely_pathogenic | 0.856 | pathogenic | -0.495 | Destabilizing | 1.0 | D | 0.769 | deleterious | D | 0.542211438 | None | None | N |
R/K | 0.2752 | likely_benign | 0.2794 | benign | -1.294 | Destabilizing | 0.997 | D | 0.45 | neutral | N | 0.493529302 | None | None | N |
R/L | 0.7605 | likely_pathogenic | 0.7773 | pathogenic | -0.495 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
R/M | 0.8549 | likely_pathogenic | 0.8623 | pathogenic | -1.012 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
R/N | 0.9616 | likely_pathogenic | 0.9631 | pathogenic | -1.063 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
R/P | 0.991 | likely_pathogenic | 0.9927 | pathogenic | -0.804 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
R/Q | 0.3328 | likely_benign | 0.3604 | ambiguous | -1.001 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
R/S | 0.9433 | likely_pathogenic | 0.948 | pathogenic | -1.896 | Destabilizing | 1.0 | D | 0.764 | deleterious | N | 0.507788882 | None | None | N |
R/T | 0.8466 | likely_pathogenic | 0.8544 | pathogenic | -1.504 | Destabilizing | 1.0 | D | 0.751 | deleterious | N | 0.481099561 | None | None | N |
R/V | 0.864 | likely_pathogenic | 0.8677 | pathogenic | -0.804 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
R/W | 0.7215 | likely_pathogenic | 0.7396 | pathogenic | -0.443 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
R/Y | 0.9095 | likely_pathogenic | 0.9145 | pathogenic | -0.217 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.