Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21012 | 63259;63260;63261 | chr2:178588691;178588690;178588689 | chr2:179453418;179453417;179453416 |
N2AB | 19371 | 58336;58337;58338 | chr2:178588691;178588690;178588689 | chr2:179453418;179453417;179453416 |
N2A | 18444 | 55555;55556;55557 | chr2:178588691;178588690;178588689 | chr2:179453418;179453417;179453416 |
N2B | 11947 | 36064;36065;36066 | chr2:178588691;178588690;178588689 | chr2:179453418;179453417;179453416 |
Novex-1 | 12072 | 36439;36440;36441 | chr2:178588691;178588690;178588689 | chr2:179453418;179453417;179453416 |
Novex-2 | 12139 | 36640;36641;36642 | chr2:178588691;178588690;178588689 | chr2:179453418;179453417;179453416 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1476856667 | None | 0.993 | N | 0.703 | 0.448 | 0.497086342495 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
P/L | rs1476856667 | None | 0.993 | N | 0.703 | 0.448 | 0.497086342495 | gnomAD-4.0.0 | 6.41017E-06 | None | None | None | None | N | None | 1.69239E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 9.57919E-06 | 0 | 0 |
P/S | None | None | 0.955 | N | 0.595 | 0.259 | 0.378498632473 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0528 | likely_benign | 0.0584 | benign | -1.054 | Destabilizing | 0.117 | N | 0.305 | neutral | N | 0.484520944 | None | None | N |
P/C | 0.4296 | ambiguous | 0.4465 | ambiguous | -0.546 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
P/D | 0.7471 | likely_pathogenic | 0.6909 | pathogenic | -1.115 | Destabilizing | 0.998 | D | 0.74 | deleterious | None | None | None | None | N |
P/E | 0.5193 | ambiguous | 0.4664 | ambiguous | -1.201 | Destabilizing | 0.995 | D | 0.673 | neutral | None | None | None | None | N |
P/F | 0.542 | ambiguous | 0.536 | ambiguous | -1.074 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
P/G | 0.3338 | likely_benign | 0.3125 | benign | -1.264 | Destabilizing | 0.966 | D | 0.595 | neutral | None | None | None | None | N |
P/H | 0.2845 | likely_benign | 0.2737 | benign | -0.901 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | N | 0.471783177 | None | None | N |
P/I | 0.2845 | likely_benign | 0.264 | benign | -0.616 | Destabilizing | 0.995 | D | 0.778 | deleterious | None | None | None | None | N |
P/K | 0.4647 | ambiguous | 0.4333 | ambiguous | -0.987 | Destabilizing | 0.995 | D | 0.681 | prob.neutral | None | None | None | None | N |
P/L | 0.1223 | likely_benign | 0.1178 | benign | -0.616 | Destabilizing | 0.993 | D | 0.703 | prob.neutral | N | 0.501279908 | None | None | N |
P/M | 0.2526 | likely_benign | 0.2374 | benign | -0.361 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
P/N | 0.3974 | ambiguous | 0.3756 | ambiguous | -0.593 | Destabilizing | 0.998 | D | 0.761 | deleterious | None | None | None | None | N |
P/Q | 0.1833 | likely_benign | 0.1772 | benign | -0.872 | Destabilizing | 0.998 | D | 0.766 | deleterious | None | None | None | None | N |
P/R | 0.2948 | likely_benign | 0.2795 | benign | -0.363 | Destabilizing | 0.997 | D | 0.757 | deleterious | N | 0.458315777 | None | None | N |
P/S | 0.1271 | likely_benign | 0.1305 | benign | -0.928 | Destabilizing | 0.955 | D | 0.595 | neutral | N | 0.485366306 | None | None | N |
P/T | 0.1073 | likely_benign | 0.1014 | benign | -0.927 | Destabilizing | 0.993 | D | 0.666 | neutral | N | 0.466337828 | None | None | N |
P/V | 0.1689 | likely_benign | 0.1574 | benign | -0.727 | Destabilizing | 0.99 | D | 0.656 | neutral | None | None | None | None | N |
P/W | 0.7459 | likely_pathogenic | 0.7244 | pathogenic | -1.201 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
P/Y | 0.5156 | ambiguous | 0.4851 | ambiguous | -0.942 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.