Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21013 | 63262;63263;63264 | chr2:178588688;178588687;178588686 | chr2:179453415;179453414;179453413 |
N2AB | 19372 | 58339;58340;58341 | chr2:178588688;178588687;178588686 | chr2:179453415;179453414;179453413 |
N2A | 18445 | 55558;55559;55560 | chr2:178588688;178588687;178588686 | chr2:179453415;179453414;179453413 |
N2B | 11948 | 36067;36068;36069 | chr2:178588688;178588687;178588686 | chr2:179453415;179453414;179453413 |
Novex-1 | 12073 | 36442;36443;36444 | chr2:178588688;178588687;178588686 | chr2:179453415;179453414;179453413 |
Novex-2 | 12140 | 36643;36644;36645 | chr2:178588688;178588687;178588686 | chr2:179453415;179453414;179453413 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1559561777 | None | 0.987 | N | 0.5 | 0.229 | 0.353761421236 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
V/I | rs1559561777 | None | 0.987 | N | 0.5 | 0.229 | 0.353761421236 | gnomAD-4.0.0 | 1.59243E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86041E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3255 | likely_benign | 0.2819 | benign | -1.507 | Destabilizing | 0.973 | D | 0.492 | neutral | N | 0.499202395 | None | None | N |
V/C | 0.6964 | likely_pathogenic | 0.6751 | pathogenic | -0.903 | Destabilizing | 0.269 | N | 0.383 | neutral | None | None | None | None | N |
V/D | 0.9732 | likely_pathogenic | 0.9645 | pathogenic | -1.539 | Destabilizing | 0.999 | D | 0.785 | deleterious | N | 0.513528777 | None | None | N |
V/E | 0.9246 | likely_pathogenic | 0.9121 | pathogenic | -1.523 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
V/F | 0.5853 | likely_pathogenic | 0.5867 | pathogenic | -1.162 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | N | 0.479064559 | None | None | N |
V/G | 0.7098 | likely_pathogenic | 0.6424 | pathogenic | -1.837 | Destabilizing | 0.998 | D | 0.724 | prob.delet. | N | 0.49880511 | None | None | N |
V/H | 0.9662 | likely_pathogenic | 0.9566 | pathogenic | -1.452 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
V/I | 0.1012 | likely_benign | 0.1045 | benign | -0.692 | Destabilizing | 0.987 | D | 0.5 | neutral | N | 0.470495641 | None | None | N |
V/K | 0.966 | likely_pathogenic | 0.9538 | pathogenic | -1.417 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
V/L | 0.443 | ambiguous | 0.4232 | ambiguous | -0.692 | Destabilizing | 0.973 | D | 0.505 | neutral | N | 0.502741345 | None | None | N |
V/M | 0.3597 | ambiguous | 0.3638 | ambiguous | -0.486 | Destabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | N |
V/N | 0.8831 | likely_pathogenic | 0.8511 | pathogenic | -1.197 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
V/P | 0.9757 | likely_pathogenic | 0.9644 | pathogenic | -0.93 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
V/Q | 0.9001 | likely_pathogenic | 0.8765 | pathogenic | -1.333 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
V/R | 0.9437 | likely_pathogenic | 0.9271 | pathogenic | -0.901 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
V/S | 0.6271 | likely_pathogenic | 0.5568 | ambiguous | -1.65 | Destabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | N |
V/T | 0.4918 | ambiguous | 0.4384 | ambiguous | -1.525 | Destabilizing | 0.996 | D | 0.541 | neutral | None | None | None | None | N |
V/W | 0.9853 | likely_pathogenic | 0.9849 | pathogenic | -1.413 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
V/Y | 0.9278 | likely_pathogenic | 0.9179 | pathogenic | -1.116 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.