Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21016 | 63271;63272;63273 | chr2:178588679;178588678;178588677 | chr2:179453406;179453405;179453404 |
N2AB | 19375 | 58348;58349;58350 | chr2:178588679;178588678;178588677 | chr2:179453406;179453405;179453404 |
N2A | 18448 | 55567;55568;55569 | chr2:178588679;178588678;178588677 | chr2:179453406;179453405;179453404 |
N2B | 11951 | 36076;36077;36078 | chr2:178588679;178588678;178588677 | chr2:179453406;179453405;179453404 |
Novex-1 | 12076 | 36451;36452;36453 | chr2:178588679;178588678;178588677 | chr2:179453406;179453405;179453404 |
Novex-2 | 12143 | 36652;36653;36654 | chr2:178588679;178588678;178588677 | chr2:179453406;179453405;179453404 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.722 | N | 0.378 | 0.153 | 0.226586394389 | gnomAD-4.0.0 | 6.84504E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99747E-07 | 0 | 0 |
S/T | rs1169239147 | None | 0.034 | N | 0.19 | 0.089 | 0.177238962908 | gnomAD-4.0.0 | 2.73802E-06 | None | None | None | None | I | None | 0 | 8.95015E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0611 | likely_benign | 0.0685 | benign | -0.236 | Destabilizing | 0.011 | N | 0.185 | neutral | None | None | None | None | I |
S/C | 0.0952 | likely_benign | 0.0926 | benign | -0.432 | Destabilizing | 0.986 | D | 0.389 | neutral | N | 0.47674129 | None | None | I |
S/D | 0.352 | ambiguous | 0.3339 | benign | 0.375 | Stabilizing | 0.775 | D | 0.325 | neutral | None | None | None | None | I |
S/E | 0.4159 | ambiguous | 0.3899 | ambiguous | 0.29 | Stabilizing | 0.775 | D | 0.331 | neutral | None | None | None | None | I |
S/F | 0.138 | likely_benign | 0.1409 | benign | -0.909 | Destabilizing | 0.961 | D | 0.456 | neutral | None | None | None | None | I |
S/G | 0.0853 | likely_benign | 0.0847 | benign | -0.316 | Destabilizing | 0.008 | N | 0.183 | neutral | N | 0.471767864 | None | None | I |
S/H | 0.2509 | likely_benign | 0.2162 | benign | -0.576 | Destabilizing | 0.996 | D | 0.36 | neutral | None | None | None | None | I |
S/I | 0.1026 | likely_benign | 0.1015 | benign | -0.158 | Destabilizing | 0.901 | D | 0.451 | neutral | N | 0.506651229 | None | None | I |
S/K | 0.4964 | ambiguous | 0.4294 | ambiguous | -0.305 | Destabilizing | 0.775 | D | 0.323 | neutral | None | None | None | None | I |
S/L | 0.0767 | likely_benign | 0.0814 | benign | -0.158 | Destabilizing | 0.633 | D | 0.425 | neutral | None | None | None | None | I |
S/M | 0.1026 | likely_benign | 0.1086 | benign | -0.267 | Destabilizing | 0.996 | D | 0.359 | neutral | None | None | None | None | I |
S/N | 0.091 | likely_benign | 0.0857 | benign | -0.17 | Destabilizing | 0.722 | D | 0.378 | neutral | N | 0.476328322 | None | None | I |
S/P | 0.5765 | likely_pathogenic | 0.5608 | ambiguous | -0.157 | Destabilizing | 0.961 | D | 0.372 | neutral | None | None | None | None | I |
S/Q | 0.3351 | likely_benign | 0.3072 | benign | -0.325 | Destabilizing | 0.961 | D | 0.327 | neutral | None | None | None | None | I |
S/R | 0.4953 | ambiguous | 0.4082 | ambiguous | -0.082 | Destabilizing | 0.901 | D | 0.363 | neutral | N | 0.45352882 | None | None | I |
S/T | 0.0543 | likely_benign | 0.056 | benign | -0.271 | Destabilizing | 0.034 | N | 0.19 | neutral | N | 0.452123311 | None | None | I |
S/V | 0.095 | likely_benign | 0.0998 | benign | -0.157 | Destabilizing | 0.633 | D | 0.413 | neutral | None | None | None | None | I |
S/W | 0.3143 | likely_benign | 0.2976 | benign | -0.989 | Destabilizing | 0.996 | D | 0.599 | neutral | None | None | None | None | I |
S/Y | 0.1387 | likely_benign | 0.1283 | benign | -0.662 | Destabilizing | 0.987 | D | 0.457 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.