Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21029 | 63310;63311;63312 | chr2:178588640;178588639;178588638 | chr2:179453367;179453366;179453365 |
N2AB | 19388 | 58387;58388;58389 | chr2:178588640;178588639;178588638 | chr2:179453367;179453366;179453365 |
N2A | 18461 | 55606;55607;55608 | chr2:178588640;178588639;178588638 | chr2:179453367;179453366;179453365 |
N2B | 11964 | 36115;36116;36117 | chr2:178588640;178588639;178588638 | chr2:179453367;179453366;179453365 |
Novex-1 | 12089 | 36490;36491;36492 | chr2:178588640;178588639;178588638 | chr2:179453367;179453366;179453365 |
Novex-2 | 12156 | 36691;36692;36693 | chr2:178588640;178588639;178588638 | chr2:179453367;179453366;179453365 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.001 | N | 0.06 | 0.087 | 0.246773566709 | gnomAD-4.0.0 | 1.60851E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.88058E-06 | 0 | 0 |
L/P | None | None | 0.912 | N | 0.399 | 0.282 | 0.71646297227 | gnomAD-4.0.0 | 1.37496E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80349E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3548 | ambiguous | 0.2649 | benign | -1.75 | Destabilizing | 0.207 | N | 0.334 | neutral | None | None | None | None | N |
L/C | 0.5993 | likely_pathogenic | 0.51 | ambiguous | -0.807 | Destabilizing | 0.981 | D | 0.32 | neutral | None | None | None | None | N |
L/D | 0.8381 | likely_pathogenic | 0.7149 | pathogenic | -1.361 | Destabilizing | 0.818 | D | 0.396 | neutral | None | None | None | None | N |
L/E | 0.5486 | ambiguous | 0.4258 | ambiguous | -1.333 | Destabilizing | 0.818 | D | 0.407 | neutral | None | None | None | None | N |
L/F | 0.1575 | likely_benign | 0.1271 | benign | -1.215 | Destabilizing | 0.001 | N | 0.06 | neutral | N | 0.492892498 | None | None | N |
L/G | 0.6872 | likely_pathogenic | 0.5503 | ambiguous | -2.087 | Highly Destabilizing | 0.563 | D | 0.385 | neutral | None | None | None | None | N |
L/H | 0.2938 | likely_benign | 0.2271 | benign | -1.232 | Destabilizing | 0.975 | D | 0.364 | neutral | N | 0.467226049 | None | None | N |
L/I | 0.0794 | likely_benign | 0.0811 | benign | -0.879 | Destabilizing | 0.001 | N | 0.068 | neutral | N | 0.393787083 | None | None | N |
L/K | 0.3928 | ambiguous | 0.3165 | benign | -1.197 | Destabilizing | 0.818 | D | 0.389 | neutral | None | None | None | None | N |
L/M | 0.1228 | likely_benign | 0.114 | benign | -0.6 | Destabilizing | 0.69 | D | 0.335 | neutral | None | None | None | None | N |
L/N | 0.4521 | ambiguous | 0.3239 | benign | -1.018 | Destabilizing | 0.818 | D | 0.41 | neutral | None | None | None | None | N |
L/P | 0.6808 | likely_pathogenic | 0.5091 | ambiguous | -1.141 | Destabilizing | 0.912 | D | 0.399 | neutral | N | 0.489582834 | None | None | N |
L/Q | 0.2114 | likely_benign | 0.1634 | benign | -1.175 | Destabilizing | 0.932 | D | 0.368 | neutral | None | None | None | None | N |
L/R | 0.3184 | likely_benign | 0.2571 | benign | -0.577 | Destabilizing | 0.773 | D | 0.381 | neutral | N | 0.453312602 | None | None | N |
L/S | 0.3864 | ambiguous | 0.2758 | benign | -1.581 | Destabilizing | 0.241 | N | 0.361 | neutral | None | None | None | None | N |
L/T | 0.3064 | likely_benign | 0.2315 | benign | -1.439 | Destabilizing | 0.008 | N | 0.119 | neutral | None | None | None | None | N |
L/V | 0.1113 | likely_benign | 0.0989 | benign | -1.141 | Destabilizing | 0.015 | N | 0.188 | neutral | N | 0.44938965 | None | None | N |
L/W | 0.3448 | ambiguous | 0.2787 | benign | -1.327 | Destabilizing | 0.944 | D | 0.359 | neutral | None | None | None | None | N |
L/Y | 0.3696 | ambiguous | 0.2855 | benign | -1.106 | Destabilizing | 0.241 | N | 0.367 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.