Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21031 | 63316;63317;63318 | chr2:178588634;178588633;178588632 | chr2:179453361;179453360;179453359 |
N2AB | 19390 | 58393;58394;58395 | chr2:178588634;178588633;178588632 | chr2:179453361;179453360;179453359 |
N2A | 18463 | 55612;55613;55614 | chr2:178588634;178588633;178588632 | chr2:179453361;179453360;179453359 |
N2B | 11966 | 36121;36122;36123 | chr2:178588634;178588633;178588632 | chr2:179453361;179453360;179453359 |
Novex-1 | 12091 | 36496;36497;36498 | chr2:178588634;178588633;178588632 | chr2:179453361;179453360;179453359 |
Novex-2 | 12158 | 36697;36698;36699 | chr2:178588634;178588633;178588632 | chr2:179453361;179453360;179453359 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | None | None | 0.56 | N | 0.535 | 0.25 | 0.512883945787 | gnomAD-4.0.0 | 1.6129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.47671E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1295 | likely_benign | 0.1413 | benign | -0.388 | Destabilizing | 0.005 | N | 0.445 | neutral | N | 0.436268424 | None | None | N |
D/C | 0.3496 | ambiguous | 0.3855 | ambiguous | -0.224 | Destabilizing | 0.864 | D | 0.517 | neutral | None | None | None | None | N |
D/E | 0.1327 | likely_benign | 0.1311 | benign | -0.363 | Destabilizing | 0.024 | N | 0.3 | neutral | N | 0.457278414 | None | None | N |
D/F | 0.4119 | ambiguous | 0.4366 | ambiguous | -0.266 | Destabilizing | 0.628 | D | 0.538 | neutral | None | None | None | None | N |
D/G | 0.0559 | likely_benign | 0.0614 | benign | -0.622 | Destabilizing | None | N | 0.222 | neutral | N | 0.322667986 | None | None | N |
D/H | 0.2008 | likely_benign | 0.2077 | benign | -0.265 | Destabilizing | 0.295 | N | 0.478 | neutral | N | 0.458990568 | None | None | N |
D/I | 0.3901 | ambiguous | 0.4107 | ambiguous | 0.196 | Stabilizing | 0.356 | N | 0.56 | neutral | None | None | None | None | N |
D/K | 0.3469 | ambiguous | 0.3149 | benign | -0.331 | Destabilizing | 0.031 | N | 0.475 | neutral | None | None | None | None | N |
D/L | 0.2716 | likely_benign | 0.2813 | benign | 0.196 | Stabilizing | 0.072 | N | 0.549 | neutral | None | None | None | None | N |
D/M | 0.4534 | ambiguous | 0.4608 | ambiguous | 0.32 | Stabilizing | 0.628 | D | 0.522 | neutral | None | None | None | None | N |
D/N | 0.0709 | likely_benign | 0.0722 | benign | -0.404 | Destabilizing | None | N | 0.166 | neutral | N | 0.380529784 | None | None | N |
D/P | 0.8033 | likely_pathogenic | 0.7751 | pathogenic | 0.024 | Stabilizing | 0.136 | N | 0.512 | neutral | None | None | None | None | N |
D/Q | 0.2391 | likely_benign | 0.2354 | benign | -0.347 | Destabilizing | 0.136 | N | 0.415 | neutral | None | None | None | None | N |
D/R | 0.3452 | ambiguous | 0.3314 | benign | -0.064 | Destabilizing | 0.136 | N | 0.529 | neutral | None | None | None | None | N |
D/S | 0.0865 | likely_benign | 0.0892 | benign | -0.615 | Destabilizing | 0.007 | N | 0.247 | neutral | None | None | None | None | N |
D/T | 0.1995 | likely_benign | 0.2058 | benign | -0.448 | Destabilizing | 0.031 | N | 0.481 | neutral | None | None | None | None | N |
D/V | 0.2612 | likely_benign | 0.2762 | benign | 0.024 | Stabilizing | 0.106 | N | 0.555 | neutral | N | 0.514345205 | None | None | N |
D/W | 0.7214 | likely_pathogenic | 0.7296 | pathogenic | -0.171 | Destabilizing | 0.864 | D | 0.523 | neutral | None | None | None | None | N |
D/Y | 0.1592 | likely_benign | 0.1692 | benign | -0.077 | Destabilizing | 0.56 | D | 0.535 | neutral | N | 0.438057935 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.