Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21032 | 63319;63320;63321 | chr2:178588631;178588630;178588629 | chr2:179453358;179453357;179453356 |
N2AB | 19391 | 58396;58397;58398 | chr2:178588631;178588630;178588629 | chr2:179453358;179453357;179453356 |
N2A | 18464 | 55615;55616;55617 | chr2:178588631;178588630;178588629 | chr2:179453358;179453357;179453356 |
N2B | 11967 | 36124;36125;36126 | chr2:178588631;178588630;178588629 | chr2:179453358;179453357;179453356 |
Novex-1 | 12092 | 36499;36500;36501 | chr2:178588631;178588630;178588629 | chr2:179453358;179453357;179453356 |
Novex-2 | 12159 | 36700;36701;36702 | chr2:178588631;178588630;178588629 | chr2:179453358;179453357;179453356 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | rs767798579 | -1.322 | 0.999 | N | 0.414 | 0.429 | 0.215109475489 | gnomAD-2.1.1 | 1.27E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.76E-05 | 0 |
H/R | rs767798579 | -1.322 | 0.999 | N | 0.414 | 0.429 | 0.215109475489 | gnomAD-4.0.0 | 2.76421E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52678E-05 | None | 0 | 0 | 1.80867E-06 | 0 | 1.67409E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.5285 | ambiguous | 0.4662 | ambiguous | -0.69 | Destabilizing | 0.993 | D | 0.455 | neutral | None | None | None | None | N |
H/C | 0.1962 | likely_benign | 0.1763 | benign | 0.342 | Stabilizing | 1.0 | D | 0.634 | neutral | None | None | None | None | N |
H/D | 0.6289 | likely_pathogenic | 0.575 | pathogenic | -0.823 | Destabilizing | 0.999 | D | 0.375 | neutral | N | 0.503280063 | None | None | N |
H/E | 0.6241 | likely_pathogenic | 0.5629 | ambiguous | -0.702 | Destabilizing | 0.998 | D | 0.414 | neutral | None | None | None | None | N |
H/F | 0.4631 | ambiguous | 0.4203 | ambiguous | 0.794 | Stabilizing | 0.991 | D | 0.366 | neutral | None | None | None | None | N |
H/G | 0.6136 | likely_pathogenic | 0.5295 | ambiguous | -1.08 | Destabilizing | 0.998 | D | 0.451 | neutral | None | None | None | None | N |
H/I | 0.5494 | ambiguous | 0.5078 | ambiguous | 0.408 | Stabilizing | 0.998 | D | 0.594 | neutral | None | None | None | None | N |
H/K | 0.3838 | ambiguous | 0.3455 | ambiguous | -0.353 | Destabilizing | 0.998 | D | 0.367 | neutral | None | None | None | None | N |
H/L | 0.2601 | likely_benign | 0.2387 | benign | 0.408 | Stabilizing | 0.98 | D | 0.537 | neutral | N | 0.483347508 | None | None | N |
H/M | 0.616 | likely_pathogenic | 0.5697 | pathogenic | 0.264 | Stabilizing | 1.0 | D | 0.522 | neutral | None | None | None | None | N |
H/N | 0.2153 | likely_benign | 0.1976 | benign | -0.569 | Destabilizing | 0.997 | D | 0.457 | neutral | N | 0.459201212 | None | None | N |
H/P | 0.9385 | likely_pathogenic | 0.9014 | pathogenic | 0.061 | Stabilizing | 0.999 | D | 0.496 | neutral | N | 0.488547987 | None | None | N |
H/Q | 0.3146 | likely_benign | 0.2818 | benign | -0.294 | Destabilizing | 0.999 | D | 0.421 | neutral | N | 0.468647414 | None | None | N |
H/R | 0.155 | likely_benign | 0.1373 | benign | -1.031 | Destabilizing | 0.999 | D | 0.414 | neutral | N | 0.450829658 | None | None | N |
H/S | 0.431 | ambiguous | 0.3726 | ambiguous | -0.448 | Destabilizing | 0.993 | D | 0.353 | neutral | None | None | None | None | N |
H/T | 0.4885 | ambiguous | 0.419 | ambiguous | -0.221 | Destabilizing | 0.998 | D | 0.469 | neutral | None | None | None | None | N |
H/V | 0.4463 | ambiguous | 0.3986 | ambiguous | 0.061 | Stabilizing | 0.996 | D | 0.557 | neutral | None | None | None | None | N |
H/W | 0.6389 | likely_pathogenic | 0.5625 | ambiguous | 1.099 | Stabilizing | 1.0 | D | 0.529 | neutral | None | None | None | None | N |
H/Y | 0.1832 | likely_benign | 0.1589 | benign | 1.082 | Stabilizing | 0.4 | N | 0.271 | neutral | N | 0.465924281 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.