Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2104 | 6535;6536;6537 | chr2:178775554;178775553;178775552 | chr2:179640281;179640280;179640279 |
N2AB | 2104 | 6535;6536;6537 | chr2:178775554;178775553;178775552 | chr2:179640281;179640280;179640279 |
N2A | 2104 | 6535;6536;6537 | chr2:178775554;178775553;178775552 | chr2:179640281;179640280;179640279 |
N2B | 2058 | 6397;6398;6399 | chr2:178775554;178775553;178775552 | chr2:179640281;179640280;179640279 |
Novex-1 | 2058 | 6397;6398;6399 | chr2:178775554;178775553;178775552 | chr2:179640281;179640280;179640279 |
Novex-2 | 2058 | 6397;6398;6399 | chr2:178775554;178775553;178775552 | chr2:179640281;179640280;179640279 |
Novex-3 | 2104 | 6535;6536;6537 | chr2:178775554;178775553;178775552 | chr2:179640281;179640280;179640279 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.477 | N | 0.593 | 0.216 | 0.241078983079 | gnomAD-4.0.0 | 1.36822E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79862E-06 | 0 | 0 |
K/R | None | None | 0.006 | N | 0.373 | 0.072 | 0.206339911435 | gnomAD-4.0.0 | 1.36822E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79862E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8037 | likely_pathogenic | 0.7656 | pathogenic | 0.092 | Stabilizing | 0.707 | D | 0.619 | neutral | None | None | None | None | I |
K/C | 0.8872 | likely_pathogenic | 0.8521 | pathogenic | -0.226 | Destabilizing | 0.995 | D | 0.736 | prob.delet. | None | None | None | None | I |
K/D | 0.9044 | likely_pathogenic | 0.8856 | pathogenic | -0.194 | Destabilizing | 0.894 | D | 0.631 | neutral | None | None | None | None | I |
K/E | 0.6277 | likely_pathogenic | 0.5583 | ambiguous | -0.203 | Destabilizing | 0.477 | N | 0.593 | neutral | N | 0.476128292 | None | None | I |
K/F | 0.9191 | likely_pathogenic | 0.9042 | pathogenic | -0.196 | Destabilizing | 0.985 | D | 0.668 | neutral | None | None | None | None | I |
K/G | 0.8768 | likely_pathogenic | 0.8601 | pathogenic | -0.059 | Destabilizing | 0.894 | D | 0.563 | neutral | None | None | None | None | I |
K/H | 0.4585 | ambiguous | 0.426 | ambiguous | -0.205 | Destabilizing | 0.985 | D | 0.635 | neutral | None | None | None | None | I |
K/I | 0.6517 | likely_pathogenic | 0.5973 | pathogenic | 0.409 | Stabilizing | 0.928 | D | 0.666 | neutral | N | 0.466711686 | None | None | I |
K/L | 0.6948 | likely_pathogenic | 0.652 | pathogenic | 0.409 | Stabilizing | 0.894 | D | 0.563 | neutral | None | None | None | None | I |
K/M | 0.5679 | likely_pathogenic | 0.5174 | ambiguous | 0.057 | Stabilizing | 0.995 | D | 0.636 | neutral | None | None | None | None | I |
K/N | 0.7586 | likely_pathogenic | 0.706 | pathogenic | 0.239 | Stabilizing | 0.864 | D | 0.623 | neutral | N | 0.437433544 | None | None | I |
K/P | 0.9819 | likely_pathogenic | 0.9807 | pathogenic | 0.328 | Stabilizing | 0.945 | D | 0.623 | neutral | None | None | None | None | I |
K/Q | 0.3158 | likely_benign | 0.2756 | benign | 0.079 | Stabilizing | 0.864 | D | 0.622 | neutral | N | 0.493833537 | None | None | I |
K/R | 0.1159 | likely_benign | 0.1067 | benign | 0.02 | Stabilizing | 0.006 | N | 0.373 | neutral | N | 0.479780528 | None | None | I |
K/S | 0.7919 | likely_pathogenic | 0.7526 | pathogenic | -0.136 | Destabilizing | 0.707 | D | 0.639 | neutral | None | None | None | None | I |
K/T | 0.522 | ambiguous | 0.4727 | ambiguous | -0.022 | Destabilizing | 0.864 | D | 0.59 | neutral | N | 0.464631586 | None | None | I |
K/V | 0.6371 | likely_pathogenic | 0.5791 | pathogenic | 0.328 | Stabilizing | 0.894 | D | 0.637 | neutral | None | None | None | None | I |
K/W | 0.9034 | likely_pathogenic | 0.8937 | pathogenic | -0.287 | Destabilizing | 0.995 | D | 0.745 | deleterious | None | None | None | None | I |
K/Y | 0.806 | likely_pathogenic | 0.7747 | pathogenic | 0.068 | Stabilizing | 0.945 | D | 0.659 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.