Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21049 | 63370;63371;63372 | chr2:178588580;178588579;178588578 | chr2:179453307;179453306;179453305 |
N2AB | 19408 | 58447;58448;58449 | chr2:178588580;178588579;178588578 | chr2:179453307;179453306;179453305 |
N2A | 18481 | 55666;55667;55668 | chr2:178588580;178588579;178588578 | chr2:179453307;179453306;179453305 |
N2B | 11984 | 36175;36176;36177 | chr2:178588580;178588579;178588578 | chr2:179453307;179453306;179453305 |
Novex-1 | 12109 | 36550;36551;36552 | chr2:178588580;178588579;178588578 | chr2:179453307;179453306;179453305 |
Novex-2 | 12176 | 36751;36752;36753 | chr2:178588580;178588579;178588578 | chr2:179453307;179453306;179453305 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | rs1559560525 | None | 0.946 | N | 0.863 | 0.497 | 0.447311733946 | gnomAD-2.1.1 | 5.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.06E-05 | 0 |
P/R | rs1559560525 | None | 0.946 | N | 0.863 | 0.497 | 0.447311733946 | gnomAD-4.0.0 | 2.86209E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.69436E-06 | 0 | 0 |
P/S | None | None | 0.898 | N | 0.741 | 0.371 | 0.279776271856 | gnomAD-4.0.0 | 1.77046E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.80962E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0918 | likely_benign | 0.085 | benign | -1.681 | Destabilizing | 0.016 | N | 0.432 | neutral | N | 0.51453442 | None | None | I |
P/C | 0.5644 | likely_pathogenic | 0.518 | ambiguous | -1.061 | Destabilizing | 0.994 | D | 0.859 | deleterious | None | None | None | None | I |
P/D | 0.8777 | likely_pathogenic | 0.8435 | pathogenic | -1.664 | Destabilizing | 0.979 | D | 0.826 | deleterious | None | None | None | None | I |
P/E | 0.7542 | likely_pathogenic | 0.7079 | pathogenic | -1.682 | Destabilizing | 0.959 | D | 0.803 | deleterious | None | None | None | None | I |
P/F | 0.5525 | ambiguous | 0.5574 | ambiguous | -1.331 | Destabilizing | 0.994 | D | 0.863 | deleterious | None | None | None | None | I |
P/G | 0.6138 | likely_pathogenic | 0.532 | ambiguous | -1.969 | Destabilizing | 0.769 | D | 0.75 | deleterious | None | None | None | None | I |
P/H | 0.541 | ambiguous | 0.513 | ambiguous | -1.372 | Destabilizing | 0.998 | D | 0.845 | deleterious | None | None | None | None | I |
P/I | 0.5351 | ambiguous | 0.4744 | ambiguous | -0.984 | Destabilizing | 0.959 | D | 0.85 | deleterious | None | None | None | None | I |
P/K | 0.8784 | likely_pathogenic | 0.8373 | pathogenic | -1.269 | Destabilizing | 0.959 | D | 0.822 | deleterious | None | None | None | None | I |
P/L | 0.3343 | likely_benign | 0.3032 | benign | -0.984 | Destabilizing | 0.898 | D | 0.787 | deleterious | N | 0.495318709 | None | None | I |
P/M | 0.5114 | ambiguous | 0.4684 | ambiguous | -0.749 | Destabilizing | 0.994 | D | 0.845 | deleterious | None | None | None | None | I |
P/N | 0.7597 | likely_pathogenic | 0.698 | pathogenic | -1.032 | Destabilizing | 0.979 | D | 0.864 | deleterious | None | None | None | None | I |
P/Q | 0.5931 | likely_pathogenic | 0.5351 | ambiguous | -1.286 | Destabilizing | 0.973 | D | 0.863 | deleterious | N | 0.511336276 | None | None | I |
P/R | 0.7905 | likely_pathogenic | 0.7375 | pathogenic | -0.666 | Destabilizing | 0.946 | D | 0.863 | deleterious | N | 0.491079201 | None | None | I |
P/S | 0.2713 | likely_benign | 0.2303 | benign | -1.524 | Destabilizing | 0.898 | D | 0.741 | deleterious | N | 0.472467967 | None | None | I |
P/T | 0.2941 | likely_benign | 0.2462 | benign | -1.449 | Destabilizing | 0.946 | D | 0.75 | deleterious | N | 0.497093135 | None | None | I |
P/V | 0.3596 | ambiguous | 0.3137 | benign | -1.184 | Destabilizing | 0.921 | D | 0.755 | deleterious | None | None | None | None | I |
P/W | 0.8027 | likely_pathogenic | 0.7868 | pathogenic | -1.442 | Destabilizing | 0.998 | D | 0.824 | deleterious | None | None | None | None | I |
P/Y | 0.5954 | likely_pathogenic | 0.5716 | pathogenic | -1.202 | Destabilizing | 0.998 | D | 0.864 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.