Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21051 | 63376;63377;63378 | chr2:178588574;178588573;178588572 | chr2:179453301;179453300;179453299 |
N2AB | 19410 | 58453;58454;58455 | chr2:178588574;178588573;178588572 | chr2:179453301;179453300;179453299 |
N2A | 18483 | 55672;55673;55674 | chr2:178588574;178588573;178588572 | chr2:179453301;179453300;179453299 |
N2B | 11986 | 36181;36182;36183 | chr2:178588574;178588573;178588572 | chr2:179453301;179453300;179453299 |
Novex-1 | 12111 | 36556;36557;36558 | chr2:178588574;178588573;178588572 | chr2:179453301;179453300;179453299 |
Novex-2 | 12178 | 36757;36758;36759 | chr2:178588574;178588573;178588572 | chr2:179453301;179453300;179453299 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.002 | N | 0.142 | 0.087 | 0.356690202451 | gnomAD-4.0.0 | 2.1566E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.77745E-06 | 0 | 0 |
L/S | None | None | 0.361 | N | 0.407 | 0.099 | 0.448099371145 | gnomAD-4.0.0 | 1.78861E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.97543E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1159 | likely_benign | 0.1063 | benign | -0.99 | Destabilizing | 0.134 | N | 0.404 | neutral | None | None | None | None | I |
L/C | 0.3265 | likely_benign | 0.3483 | ambiguous | -0.721 | Destabilizing | 0.984 | D | 0.393 | neutral | None | None | None | None | I |
L/D | 0.3337 | likely_benign | 0.2983 | benign | -0.22 | Destabilizing | 0.842 | D | 0.398 | neutral | None | None | None | None | I |
L/E | 0.1778 | likely_benign | 0.1695 | benign | -0.285 | Destabilizing | 0.428 | N | 0.413 | neutral | None | None | None | None | I |
L/F | 0.091 | likely_benign | 0.092 | benign | -0.782 | Destabilizing | 0.002 | N | 0.142 | neutral | N | 0.52105496 | None | None | I |
L/G | 0.2658 | likely_benign | 0.2676 | benign | -1.212 | Destabilizing | 0.001 | N | 0.255 | neutral | None | None | None | None | I |
L/H | 0.148 | likely_benign | 0.1535 | benign | -0.351 | Destabilizing | 0.984 | D | 0.319 | neutral | None | None | None | None | I |
L/I | 0.0849 | likely_benign | 0.0837 | benign | -0.506 | Destabilizing | 0.272 | N | 0.341 | neutral | None | None | None | None | I |
L/K | 0.1676 | likely_benign | 0.1812 | benign | -0.537 | Destabilizing | 0.004 | N | 0.194 | neutral | None | None | None | None | I |
L/M | 0.0921 | likely_benign | 0.0913 | benign | -0.458 | Destabilizing | 0.8 | D | 0.459 | neutral | N | 0.472839726 | None | None | I |
L/N | 0.1804 | likely_benign | 0.1589 | benign | -0.295 | Destabilizing | 0.724 | D | 0.398 | neutral | None | None | None | None | I |
L/P | 0.0916 | likely_benign | 0.0888 | benign | -0.634 | Destabilizing | 0.942 | D | 0.406 | neutral | None | None | None | None | I |
L/Q | 0.0966 | likely_benign | 0.1013 | benign | -0.521 | Destabilizing | 0.724 | D | 0.429 | neutral | None | None | None | None | I |
L/R | 0.1593 | likely_benign | 0.1895 | benign | 0.068 | Stabilizing | 0.272 | N | 0.433 | neutral | None | None | None | None | I |
L/S | 0.1212 | likely_benign | 0.1098 | benign | -0.864 | Destabilizing | 0.361 | N | 0.407 | neutral | N | 0.447690565 | None | None | I |
L/T | 0.1373 | likely_benign | 0.1261 | benign | -0.814 | Destabilizing | 0.603 | D | 0.461 | neutral | None | None | None | None | I |
L/V | 0.0753 | likely_benign | 0.076 | benign | -0.634 | Destabilizing | 0.22 | N | 0.321 | neutral | N | 0.446903918 | None | None | I |
L/W | 0.1996 | likely_benign | 0.2225 | benign | -0.758 | Destabilizing | 0.979 | D | 0.346 | neutral | N | 0.510011247 | None | None | I |
L/Y | 0.1771 | likely_benign | 0.174 | benign | -0.539 | Destabilizing | 0.568 | D | 0.47 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.