Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21069 | 63430;63431;63432 | chr2:178588202;178588201;178588200 | chr2:179452929;179452928;179452927 |
N2AB | 19428 | 58507;58508;58509 | chr2:178588202;178588201;178588200 | chr2:179452929;179452928;179452927 |
N2A | 18501 | 55726;55727;55728 | chr2:178588202;178588201;178588200 | chr2:179452929;179452928;179452927 |
N2B | 12004 | 36235;36236;36237 | chr2:178588202;178588201;178588200 | chr2:179452929;179452928;179452927 |
Novex-1 | 12129 | 36610;36611;36612 | chr2:178588202;178588201;178588200 | chr2:179452929;179452928;179452927 |
Novex-2 | 12196 | 36811;36812;36813 | chr2:178588202;178588201;178588200 | chr2:179452929;179452928;179452927 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.061 | N | 0.125 | 0.114 | 0.110078149338 | gnomAD-4.0.0 | 7.00326E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.70016E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0732 | likely_benign | 0.0769 | benign | -0.728 | Destabilizing | 0.061 | N | 0.125 | neutral | N | 0.433094833 | None | None | N |
T/C | 0.3215 | likely_benign | 0.3241 | benign | -0.434 | Destabilizing | 0.999 | D | 0.557 | neutral | None | None | None | None | N |
T/D | 0.4958 | ambiguous | 0.5131 | ambiguous | -0.271 | Destabilizing | 0.969 | D | 0.555 | neutral | None | None | None | None | N |
T/E | 0.395 | ambiguous | 0.4219 | ambiguous | -0.264 | Destabilizing | 0.969 | D | 0.54 | neutral | None | None | None | None | N |
T/F | 0.2922 | likely_benign | 0.3073 | benign | -0.794 | Destabilizing | 0.991 | D | 0.581 | neutral | None | None | None | None | N |
T/G | 0.1552 | likely_benign | 0.1564 | benign | -0.998 | Destabilizing | 0.02 | N | 0.313 | neutral | None | None | None | None | N |
T/H | 0.3312 | likely_benign | 0.336 | benign | -1.318 | Destabilizing | 0.999 | D | 0.57 | neutral | None | None | None | None | N |
T/I | 0.1631 | likely_benign | 0.1618 | benign | -0.099 | Destabilizing | 0.134 | N | 0.312 | neutral | N | 0.440503595 | None | None | N |
T/K | 0.3177 | likely_benign | 0.3497 | ambiguous | -0.762 | Destabilizing | 0.969 | D | 0.547 | neutral | None | None | None | None | N |
T/L | 0.0975 | likely_benign | 0.1035 | benign | -0.099 | Destabilizing | 0.759 | D | 0.445 | neutral | None | None | None | None | N |
T/M | 0.1046 | likely_benign | 0.1068 | benign | 0.145 | Stabilizing | 0.991 | D | 0.568 | neutral | None | None | None | None | N |
T/N | 0.1305 | likely_benign | 0.1366 | benign | -0.727 | Destabilizing | 0.988 | D | 0.495 | neutral | N | 0.476981683 | None | None | N |
T/P | 0.2102 | likely_benign | 0.2245 | benign | -0.276 | Destabilizing | 0.988 | D | 0.577 | neutral | N | 0.461089511 | None | None | N |
T/Q | 0.2747 | likely_benign | 0.2833 | benign | -0.843 | Destabilizing | 0.997 | D | 0.578 | neutral | None | None | None | None | N |
T/R | 0.2597 | likely_benign | 0.2933 | benign | -0.565 | Destabilizing | 0.991 | D | 0.586 | neutral | None | None | None | None | N |
T/S | 0.1009 | likely_benign | 0.1056 | benign | -0.964 | Destabilizing | 0.704 | D | 0.415 | neutral | N | 0.366888483 | None | None | N |
T/V | 0.1194 | likely_benign | 0.117 | benign | -0.276 | Destabilizing | 0.759 | D | 0.425 | neutral | None | None | None | None | N |
T/W | 0.6342 | likely_pathogenic | 0.6502 | pathogenic | -0.774 | Destabilizing | 0.999 | D | 0.622 | neutral | None | None | None | None | N |
T/Y | 0.3161 | likely_benign | 0.3279 | benign | -0.531 | Destabilizing | 0.997 | D | 0.585 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.