Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21071 | 63436;63437;63438 | chr2:178588196;178588195;178588194 | chr2:179452923;179452922;179452921 |
N2AB | 19430 | 58513;58514;58515 | chr2:178588196;178588195;178588194 | chr2:179452923;179452922;179452921 |
N2A | 18503 | 55732;55733;55734 | chr2:178588196;178588195;178588194 | chr2:179452923;179452922;179452921 |
N2B | 12006 | 36241;36242;36243 | chr2:178588196;178588195;178588194 | chr2:179452923;179452922;179452921 |
Novex-1 | 12131 | 36616;36617;36618 | chr2:178588196;178588195;178588194 | chr2:179452923;179452922;179452921 |
Novex-2 | 12198 | 36817;36818;36819 | chr2:178588196;178588195;178588194 | chr2:179452923;179452922;179452921 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | None | N | 0.209 | 0.049 | 0.130388298395 | gnomAD-4.0.0 | 1.67094E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.82582E-05 | None | 0 | 0 | 0 | 0 | 0 |
F/Y | rs2154182814 | None | 0.106 | N | 0.574 | 0.183 | 0.370424759081 | gnomAD-4.0.0 | 1.66884E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.15278E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.5997 | likely_pathogenic | 0.5386 | ambiguous | -2.661 | Highly Destabilizing | 0.031 | N | 0.573 | neutral | None | None | None | None | N |
F/C | 0.3193 | likely_benign | 0.2619 | benign | -1.43 | Destabilizing | 0.56 | D | 0.709 | prob.delet. | N | 0.461742872 | None | None | N |
F/D | 0.9666 | likely_pathogenic | 0.9661 | pathogenic | -3.463 | Highly Destabilizing | 0.628 | D | 0.743 | deleterious | None | None | None | None | N |
F/E | 0.9681 | likely_pathogenic | 0.9675 | pathogenic | -3.236 | Highly Destabilizing | 0.356 | N | 0.749 | deleterious | None | None | None | None | N |
F/G | 0.8485 | likely_pathogenic | 0.827 | pathogenic | -3.108 | Highly Destabilizing | 0.136 | N | 0.704 | prob.neutral | None | None | None | None | N |
F/H | 0.9044 | likely_pathogenic | 0.8985 | pathogenic | -1.874 | Destabilizing | 0.628 | D | 0.695 | prob.neutral | None | None | None | None | N |
F/I | 0.1415 | likely_benign | 0.1167 | benign | -1.187 | Destabilizing | 0.012 | N | 0.489 | neutral | N | 0.390706706 | None | None | N |
F/K | 0.9595 | likely_pathogenic | 0.9616 | pathogenic | -1.982 | Destabilizing | 0.136 | N | 0.714 | prob.delet. | None | None | None | None | N |
F/L | 0.2123 | likely_benign | 0.1896 | benign | -1.187 | Destabilizing | None | N | 0.209 | neutral | N | 0.301769851 | None | None | N |
F/M | 0.2973 | likely_benign | 0.2538 | benign | -0.878 | Destabilizing | 0.12 | N | 0.72 | prob.delet. | None | None | None | None | N |
F/N | 0.9223 | likely_pathogenic | 0.9116 | pathogenic | -2.584 | Highly Destabilizing | 0.628 | D | 0.753 | deleterious | None | None | None | None | N |
F/P | 0.543 | ambiguous | 0.4487 | ambiguous | -1.692 | Destabilizing | 0.628 | D | 0.755 | deleterious | None | None | None | None | N |
F/Q | 0.9367 | likely_pathogenic | 0.9285 | pathogenic | -2.471 | Highly Destabilizing | 0.628 | D | 0.757 | deleterious | None | None | None | None | N |
F/R | 0.9182 | likely_pathogenic | 0.9145 | pathogenic | -1.675 | Destabilizing | 0.356 | N | 0.745 | deleterious | None | None | None | None | N |
F/S | 0.8425 | likely_pathogenic | 0.8161 | pathogenic | -3.074 | Highly Destabilizing | 0.106 | N | 0.644 | neutral | N | 0.472439868 | None | None | N |
F/T | 0.7225 | likely_pathogenic | 0.6658 | pathogenic | -2.732 | Highly Destabilizing | 0.072 | N | 0.617 | neutral | None | None | None | None | N |
F/V | 0.1515 | likely_benign | 0.1237 | benign | -1.692 | Destabilizing | 0.005 | N | 0.544 | neutral | N | 0.343064687 | None | None | N |
F/W | 0.718 | likely_pathogenic | 0.7241 | pathogenic | -0.276 | Destabilizing | 0.864 | D | 0.613 | neutral | None | None | None | None | N |
F/Y | 0.4108 | ambiguous | 0.4528 | ambiguous | -0.672 | Destabilizing | 0.106 | N | 0.574 | neutral | N | 0.491198987 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.