Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21073 | 63442;63443;63444 | chr2:178588190;178588189;178588188 | chr2:179452917;179452916;179452915 |
N2AB | 19432 | 58519;58520;58521 | chr2:178588190;178588189;178588188 | chr2:179452917;179452916;179452915 |
N2A | 18505 | 55738;55739;55740 | chr2:178588190;178588189;178588188 | chr2:179452917;179452916;179452915 |
N2B | 12008 | 36247;36248;36249 | chr2:178588190;178588189;178588188 | chr2:179452917;179452916;179452915 |
Novex-1 | 12133 | 36622;36623;36624 | chr2:178588190;178588189;178588188 | chr2:179452917;179452916;179452915 |
Novex-2 | 12200 | 36823;36824;36825 | chr2:178588190;178588189;178588188 | chr2:179452917;179452916;179452915 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs777982485 | -0.568 | 1.0 | N | 0.785 | 0.468 | 0.563246863647 | gnomAD-2.1.1 | 8.48E-06 | None | None | None | None | N | None | 0 | 3.02E-05 | None | 0 | 0 | None | 3.67E-05 | None | 0 | 0 | 0 |
V/M | rs777982485 | -0.568 | 1.0 | N | 0.785 | 0.468 | 0.563246863647 | gnomAD-4.0.0 | 2.09176E-06 | None | None | None | None | N | None | 0 | 2.3084E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 1.20607E-05 | 1.69153E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3024 | likely_benign | 0.291 | benign | -1.442 | Destabilizing | 0.999 | D | 0.655 | neutral | N | 0.467774387 | None | None | N |
V/C | 0.8554 | likely_pathogenic | 0.8308 | pathogenic | -1.245 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
V/D | 0.8763 | likely_pathogenic | 0.8722 | pathogenic | -0.989 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
V/E | 0.7655 | likely_pathogenic | 0.7664 | pathogenic | -0.874 | Destabilizing | 1.0 | D | 0.875 | deleterious | D | 0.524158429 | None | None | N |
V/F | 0.5109 | ambiguous | 0.5089 | ambiguous | -0.809 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
V/G | 0.5753 | likely_pathogenic | 0.5776 | pathogenic | -1.859 | Destabilizing | 1.0 | D | 0.855 | deleterious | N | 0.505040216 | None | None | N |
V/H | 0.9259 | likely_pathogenic | 0.917 | pathogenic | -1.188 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
V/I | 0.0868 | likely_benign | 0.0836 | benign | -0.354 | Destabilizing | 0.998 | D | 0.633 | neutral | None | None | None | None | N |
V/K | 0.8332 | likely_pathogenic | 0.8209 | pathogenic | -1.222 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
V/L | 0.4059 | ambiguous | 0.3718 | ambiguous | -0.354 | Destabilizing | 0.997 | D | 0.649 | neutral | N | 0.516444148 | None | None | N |
V/M | 0.3211 | likely_benign | 0.3024 | benign | -0.497 | Destabilizing | 1.0 | D | 0.785 | deleterious | N | 0.511788166 | None | None | N |
V/N | 0.7854 | likely_pathogenic | 0.7712 | pathogenic | -1.344 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
V/P | 0.622 | likely_pathogenic | 0.5893 | pathogenic | -0.683 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
V/Q | 0.8021 | likely_pathogenic | 0.7891 | pathogenic | -1.287 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
V/R | 0.8035 | likely_pathogenic | 0.7937 | pathogenic | -0.913 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
V/S | 0.6392 | likely_pathogenic | 0.6038 | pathogenic | -2.008 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
V/T | 0.4468 | ambiguous | 0.4104 | ambiguous | -1.743 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | N |
V/W | 0.9576 | likely_pathogenic | 0.9554 | pathogenic | -1.047 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
V/Y | 0.8746 | likely_pathogenic | 0.8682 | pathogenic | -0.71 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.