Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21079 | 63460;63461;63462 | chr2:178588172;178588171;178588170 | chr2:179452899;179452898;179452897 |
N2AB | 19438 | 58537;58538;58539 | chr2:178588172;178588171;178588170 | chr2:179452899;179452898;179452897 |
N2A | 18511 | 55756;55757;55758 | chr2:178588172;178588171;178588170 | chr2:179452899;179452898;179452897 |
N2B | 12014 | 36265;36266;36267 | chr2:178588172;178588171;178588170 | chr2:179452899;179452898;179452897 |
Novex-1 | 12139 | 36640;36641;36642 | chr2:178588172;178588171;178588170 | chr2:179452899;179452898;179452897 |
Novex-2 | 12206 | 36841;36842;36843 | chr2:178588172;178588171;178588170 | chr2:179452899;179452898;179452897 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | rs2049447997 | None | 0.003 | N | 0.179 | 0.078 | 0.0297737177859 | gnomAD-4.0.0 | 8.40239E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.18768E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.139 | likely_benign | 0.1458 | benign | -0.334 | Destabilizing | None | N | 0.133 | neutral | None | None | None | None | N |
H/C | 0.1322 | likely_benign | 0.143 | benign | 0.239 | Stabilizing | 0.132 | N | 0.347 | neutral | None | None | None | None | N |
H/D | 0.097 | likely_benign | 0.1186 | benign | 0.085 | Stabilizing | 0.001 | N | 0.189 | neutral | N | 0.387607685 | None | None | N |
H/E | 0.1887 | likely_benign | 0.2045 | benign | 0.111 | Stabilizing | 0.001 | N | 0.127 | neutral | None | None | None | None | N |
H/F | 0.261 | likely_benign | 0.2552 | benign | 0.127 | Stabilizing | 0.041 | N | 0.361 | neutral | None | None | None | None | N |
H/G | 0.1523 | likely_benign | 0.153 | benign | -0.616 | Destabilizing | 0.001 | N | 0.241 | neutral | None | None | None | None | N |
H/I | 0.2994 | likely_benign | 0.3266 | benign | 0.39 | Stabilizing | 0.004 | N | 0.291 | neutral | None | None | None | None | N |
H/K | 0.1401 | likely_benign | 0.1477 | benign | -0.248 | Destabilizing | 0.001 | N | 0.194 | neutral | None | None | None | None | N |
H/L | 0.1315 | likely_benign | 0.1345 | benign | 0.39 | Stabilizing | 0.001 | N | 0.266 | neutral | N | 0.501106549 | None | None | N |
H/M | 0.2853 | likely_benign | 0.2814 | benign | 0.349 | Stabilizing | 0.132 | N | 0.398 | neutral | None | None | None | None | N |
H/N | 0.0442 | likely_benign | 0.0509 | benign | -0.053 | Destabilizing | None | N | 0.056 | neutral | N | 0.361055802 | None | None | N |
H/P | 0.5827 | likely_pathogenic | 0.6122 | pathogenic | 0.173 | Stabilizing | 0.007 | N | 0.271 | neutral | N | 0.501279908 | None | None | N |
H/Q | 0.1163 | likely_benign | 0.1216 | benign | 0.007 | Stabilizing | 0.007 | N | 0.211 | neutral | N | 0.452544598 | None | None | N |
H/R | 0.0987 | likely_benign | 0.1056 | benign | -0.545 | Destabilizing | 0.003 | N | 0.179 | neutral | N | 0.418181308 | None | None | N |
H/S | 0.0756 | likely_benign | 0.0788 | benign | -0.191 | Destabilizing | None | N | 0.063 | neutral | None | None | None | None | N |
H/T | 0.0843 | likely_benign | 0.0846 | benign | -0.068 | Destabilizing | None | N | 0.084 | neutral | None | None | None | None | N |
H/V | 0.2288 | likely_benign | 0.2382 | benign | 0.173 | Stabilizing | 0.002 | N | 0.264 | neutral | None | None | None | None | N |
H/W | 0.3829 | ambiguous | 0.3983 | ambiguous | 0.224 | Stabilizing | 0.316 | N | 0.328 | neutral | None | None | None | None | N |
H/Y | 0.0892 | likely_benign | 0.0966 | benign | 0.564 | Stabilizing | 0.013 | N | 0.223 | neutral | N | 0.489985479 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.