Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21080 | 63463;63464;63465 | chr2:178588169;178588168;178588167 | chr2:179452896;179452895;179452894 |
N2AB | 19439 | 58540;58541;58542 | chr2:178588169;178588168;178588167 | chr2:179452896;179452895;179452894 |
N2A | 18512 | 55759;55760;55761 | chr2:178588169;178588168;178588167 | chr2:179452896;179452895;179452894 |
N2B | 12015 | 36268;36269;36270 | chr2:178588169;178588168;178588167 | chr2:179452896;179452895;179452894 |
Novex-1 | 12140 | 36643;36644;36645 | chr2:178588169;178588168;178588167 | chr2:179452896;179452895;179452894 |
Novex-2 | 12207 | 36844;36845;36846 | chr2:178588169;178588168;178588167 | chr2:179452896;179452895;179452894 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | rs769809225 | -0.552 | 0.76 | N | 0.423 | 0.216 | 0.201204373187 | gnomAD-2.1.1 | 4.08E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.35E-05 | None | 0 | 0 | 0 |
S/A | rs769809225 | -0.552 | 0.76 | N | 0.423 | 0.216 | 0.201204373187 | gnomAD-4.0.0 | 1.61541E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.44898E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2323 | likely_benign | 0.2508 | benign | -0.292 | Destabilizing | 0.76 | D | 0.423 | neutral | N | 0.478772887 | None | None | N |
S/C | 0.236 | likely_benign | 0.2543 | benign | -0.905 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | N | 0.501538405 | None | None | N |
S/D | 0.8781 | likely_pathogenic | 0.8767 | pathogenic | -2.046 | Highly Destabilizing | 0.953 | D | 0.559 | neutral | None | None | None | None | N |
S/E | 0.926 | likely_pathogenic | 0.911 | pathogenic | -1.987 | Destabilizing | 0.953 | D | 0.565 | neutral | None | None | None | None | N |
S/F | 0.7412 | likely_pathogenic | 0.7169 | pathogenic | -0.827 | Destabilizing | 0.991 | D | 0.798 | deleterious | N | 0.49749948 | None | None | N |
S/G | 0.2628 | likely_benign | 0.2737 | benign | -0.499 | Destabilizing | 0.953 | D | 0.448 | neutral | None | None | None | None | N |
S/H | 0.7337 | likely_pathogenic | 0.6931 | pathogenic | -1.08 | Destabilizing | 0.999 | D | 0.73 | prob.delet. | None | None | None | None | N |
S/I | 0.7948 | likely_pathogenic | 0.7921 | pathogenic | 0.156 | Stabilizing | 0.986 | D | 0.773 | deleterious | None | None | None | None | N |
S/K | 0.9706 | likely_pathogenic | 0.9652 | pathogenic | -0.445 | Destabilizing | 0.953 | D | 0.56 | neutral | None | None | None | None | N |
S/L | 0.4623 | ambiguous | 0.4644 | ambiguous | 0.156 | Stabilizing | 0.91 | D | 0.653 | neutral | None | None | None | None | N |
S/M | 0.5817 | likely_pathogenic | 0.5469 | ambiguous | 0.241 | Stabilizing | 0.999 | D | 0.734 | prob.delet. | None | None | None | None | N |
S/N | 0.5374 | ambiguous | 0.5544 | ambiguous | -1.023 | Destabilizing | 0.953 | D | 0.569 | neutral | None | None | None | None | N |
S/P | 0.9928 | likely_pathogenic | 0.9925 | pathogenic | 0.037 | Stabilizing | 0.991 | D | 0.733 | prob.delet. | D | 0.535518415 | None | None | N |
S/Q | 0.8786 | likely_pathogenic | 0.8536 | pathogenic | -1.214 | Destabilizing | 0.993 | D | 0.649 | neutral | None | None | None | None | N |
S/R | 0.9446 | likely_pathogenic | 0.9432 | pathogenic | -0.367 | Destabilizing | 0.986 | D | 0.746 | deleterious | None | None | None | None | N |
S/T | 0.1296 | likely_benign | 0.1384 | benign | -0.659 | Destabilizing | 0.046 | N | 0.391 | neutral | N | 0.514484065 | None | None | N |
S/V | 0.7158 | likely_pathogenic | 0.7068 | pathogenic | 0.037 | Stabilizing | 0.973 | D | 0.694 | prob.neutral | None | None | None | None | N |
S/W | 0.8363 | likely_pathogenic | 0.8095 | pathogenic | -1.065 | Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | N |
S/Y | 0.6497 | likely_pathogenic | 0.624 | pathogenic | -0.565 | Destabilizing | 0.997 | D | 0.792 | deleterious | N | 0.498295947 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.