Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21081 | 63466;63467;63468 | chr2:178588166;178588165;178588164 | chr2:179452893;179452892;179452891 |
N2AB | 19440 | 58543;58544;58545 | chr2:178588166;178588165;178588164 | chr2:179452893;179452892;179452891 |
N2A | 18513 | 55762;55763;55764 | chr2:178588166;178588165;178588164 | chr2:179452893;179452892;179452891 |
N2B | 12016 | 36271;36272;36273 | chr2:178588166;178588165;178588164 | chr2:179452893;179452892;179452891 |
Novex-1 | 12141 | 36646;36647;36648 | chr2:178588166;178588165;178588164 | chr2:179452893;179452892;179452891 |
Novex-2 | 12208 | 36847;36848;36849 | chr2:178588166;178588165;178588164 | chr2:179452893;179452892;179452891 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.722 | N | 0.808 | 0.48 | 0.580021155531 | gnomAD-4.0.0 | 6.88023E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.04347E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8009 | likely_pathogenic | 0.7635 | pathogenic | -3.019 | Highly Destabilizing | 0.415 | N | 0.738 | prob.delet. | None | None | None | None | N |
I/C | 0.9059 | likely_pathogenic | 0.8861 | pathogenic | -3.017 | Highly Destabilizing | 0.996 | D | 0.764 | deleterious | None | None | None | None | N |
I/D | 0.9988 | likely_pathogenic | 0.9981 | pathogenic | -3.518 | Highly Destabilizing | 0.987 | D | 0.828 | deleterious | None | None | None | None | N |
I/E | 0.9956 | likely_pathogenic | 0.9935 | pathogenic | -3.231 | Highly Destabilizing | 0.961 | D | 0.832 | deleterious | None | None | None | None | N |
I/F | 0.7263 | likely_pathogenic | 0.7171 | pathogenic | -1.941 | Destabilizing | 0.923 | D | 0.721 | prob.delet. | None | None | None | None | N |
I/G | 0.9872 | likely_pathogenic | 0.9827 | pathogenic | -3.609 | Highly Destabilizing | 0.961 | D | 0.824 | deleterious | None | None | None | None | N |
I/H | 0.9934 | likely_pathogenic | 0.9914 | pathogenic | -3.115 | Highly Destabilizing | 0.996 | D | 0.799 | deleterious | None | None | None | None | N |
I/K | 0.9908 | likely_pathogenic | 0.9873 | pathogenic | -2.403 | Highly Destabilizing | 0.949 | D | 0.831 | deleterious | N | 0.499919702 | None | None | N |
I/L | 0.3267 | likely_benign | 0.2884 | benign | -1.262 | Destabilizing | 0.003 | N | 0.271 | neutral | N | 0.477679824 | None | None | N |
I/M | 0.3207 | likely_benign | 0.2726 | benign | -1.697 | Destabilizing | 0.901 | D | 0.663 | neutral | N | 0.500636829 | None | None | N |
I/N | 0.9781 | likely_pathogenic | 0.971 | pathogenic | -3.0 | Highly Destabilizing | 0.987 | D | 0.824 | deleterious | None | None | None | None | N |
I/P | 0.9971 | likely_pathogenic | 0.997 | pathogenic | -1.836 | Destabilizing | 0.987 | D | 0.819 | deleterious | None | None | None | None | N |
I/Q | 0.9903 | likely_pathogenic | 0.9859 | pathogenic | -2.749 | Highly Destabilizing | 0.987 | D | 0.837 | deleterious | None | None | None | None | N |
I/R | 0.9825 | likely_pathogenic | 0.9773 | pathogenic | -2.246 | Highly Destabilizing | 0.949 | D | 0.821 | deleterious | N | 0.488563397 | None | None | N |
I/S | 0.9385 | likely_pathogenic | 0.9201 | pathogenic | -3.714 | Highly Destabilizing | 0.923 | D | 0.784 | deleterious | None | None | None | None | N |
I/T | 0.9025 | likely_pathogenic | 0.8835 | pathogenic | -3.258 | Highly Destabilizing | 0.722 | D | 0.808 | deleterious | N | 0.481308468 | None | None | N |
I/V | 0.0824 | likely_benign | 0.0819 | benign | -1.836 | Destabilizing | 0.003 | N | 0.203 | neutral | N | 0.376166036 | None | None | N |
I/W | 0.9957 | likely_pathogenic | 0.995 | pathogenic | -2.239 | Highly Destabilizing | 0.996 | D | 0.786 | deleterious | None | None | None | None | N |
I/Y | 0.9717 | likely_pathogenic | 0.9669 | pathogenic | -2.06 | Highly Destabilizing | 0.961 | D | 0.807 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.