Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21084 | 63475;63476;63477 | chr2:178588157;178588156;178588155 | chr2:179452884;179452883;179452882 |
N2AB | 19443 | 58552;58553;58554 | chr2:178588157;178588156;178588155 | chr2:179452884;179452883;179452882 |
N2A | 18516 | 55771;55772;55773 | chr2:178588157;178588156;178588155 | chr2:179452884;179452883;179452882 |
N2B | 12019 | 36280;36281;36282 | chr2:178588157;178588156;178588155 | chr2:179452884;179452883;179452882 |
Novex-1 | 12144 | 36655;36656;36657 | chr2:178588157;178588156;178588155 | chr2:179452884;179452883;179452882 |
Novex-2 | 12211 | 36856;36857;36858 | chr2:178588157;178588156;178588155 | chr2:179452884;179452883;179452882 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | rs1342843033 | -0.873 | 0.062 | N | 0.629 | 0.091 | 0.0806252709748 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.3E-05 | None | 0 | 0 | 0 |
G/E | rs1342843033 | -0.873 | 0.062 | N | 0.629 | 0.091 | 0.0806252709748 | gnomAD-4.0.0 | 1.60416E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.44084E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.0722 | likely_benign | 0.0918 | benign | -0.309 | Destabilizing | None | N | 0.241 | neutral | N | 0.397883394 | None | None | N |
G/C | 0.137 | likely_benign | 0.1551 | benign | -0.547 | Destabilizing | 0.824 | D | 0.674 | neutral | None | None | None | None | N |
G/D | 0.3697 | ambiguous | 0.4544 | ambiguous | -2.007 | Highly Destabilizing | 0.149 | N | 0.65 | neutral | None | None | None | None | N |
G/E | 0.2304 | likely_benign | 0.29 | benign | -1.763 | Destabilizing | 0.062 | N | 0.629 | neutral | N | 0.414178211 | None | None | N |
G/F | 0.4874 | ambiguous | 0.5626 | ambiguous | -0.189 | Destabilizing | 0.555 | D | 0.689 | prob.neutral | None | None | None | None | N |
G/H | 0.361 | ambiguous | 0.4362 | ambiguous | -1.816 | Destabilizing | 0.698 | D | 0.624 | neutral | None | None | None | None | N |
G/I | 0.2097 | likely_benign | 0.2772 | benign | 0.979 | Stabilizing | 0.38 | N | 0.704 | prob.neutral | None | None | None | None | N |
G/K | 0.3967 | ambiguous | 0.5231 | ambiguous | -0.582 | Destabilizing | 0.001 | N | 0.555 | neutral | None | None | None | None | N |
G/L | 0.2595 | likely_benign | 0.3165 | benign | 0.979 | Stabilizing | 0.081 | N | 0.709 | prob.delet. | None | None | None | None | N |
G/M | 0.3084 | likely_benign | 0.3858 | ambiguous | 0.464 | Stabilizing | 0.824 | D | 0.675 | prob.neutral | None | None | None | None | N |
G/N | 0.2844 | likely_benign | 0.3486 | ambiguous | -1.016 | Destabilizing | 0.081 | N | 0.607 | neutral | None | None | None | None | N |
G/P | 0.9668 | likely_pathogenic | 0.978 | pathogenic | 0.594 | Stabilizing | 0.38 | N | 0.671 | neutral | None | None | None | None | N |
G/Q | 0.2721 | likely_benign | 0.3323 | benign | -0.678 | Destabilizing | 0.001 | N | 0.553 | neutral | None | None | None | None | N |
G/R | 0.2943 | likely_benign | 0.3886 | ambiguous | -1.049 | Destabilizing | 0.188 | N | 0.676 | prob.neutral | N | 0.41192734 | None | None | N |
G/S | 0.0751 | likely_benign | 0.0861 | benign | -1.278 | Destabilizing | 0.001 | N | 0.191 | neutral | None | None | None | None | N |
G/T | 0.1017 | likely_benign | 0.132 | benign | -0.907 | Destabilizing | 0.081 | N | 0.649 | neutral | None | None | None | None | N |
G/V | 0.1587 | likely_benign | 0.2104 | benign | 0.594 | Stabilizing | 0.062 | N | 0.713 | prob.delet. | N | 0.411852769 | None | None | N |
G/W | 0.4422 | ambiguous | 0.4932 | ambiguous | -1.21 | Destabilizing | 0.915 | D | 0.662 | neutral | N | 0.508187237 | None | None | N |
G/Y | 0.3942 | ambiguous | 0.4733 | ambiguous | -0.471 | Destabilizing | 0.555 | D | 0.687 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.