Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21087 | 63484;63485;63486 | chr2:178588148;178588147;178588146 | chr2:179452875;179452874;179452873 |
N2AB | 19446 | 58561;58562;58563 | chr2:178588148;178588147;178588146 | chr2:179452875;179452874;179452873 |
N2A | 18519 | 55780;55781;55782 | chr2:178588148;178588147;178588146 | chr2:179452875;179452874;179452873 |
N2B | 12022 | 36289;36290;36291 | chr2:178588148;178588147;178588146 | chr2:179452875;179452874;179452873 |
Novex-1 | 12147 | 36664;36665;36666 | chr2:178588148;178588147;178588146 | chr2:179452875;179452874;179452873 |
Novex-2 | 12214 | 36865;36866;36867 | chr2:178588148;178588147;178588146 | chr2:179452875;179452874;179452873 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1395427495 | -0.527 | 0.999 | N | 0.62 | 0.233 | 0.342631996419 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/R | rs1395427495 | -0.527 | 0.999 | N | 0.62 | 0.233 | 0.342631996419 | gnomAD-4.0.0 | 6.57523E-06 | None | None | None | None | I | None | 2.41196E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4065 | ambiguous | 0.4399 | ambiguous | -0.151 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | I |
K/C | 0.7498 | likely_pathogenic | 0.7431 | pathogenic | -0.423 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | I |
K/D | 0.6507 | likely_pathogenic | 0.6772 | pathogenic | 0.004 | Stabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | I |
K/E | 0.2905 | likely_benign | 0.3335 | benign | 0.063 | Stabilizing | 0.999 | D | 0.653 | neutral | N | 0.511630187 | None | None | I |
K/F | 0.7741 | likely_pathogenic | 0.8136 | pathogenic | -0.213 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | I |
K/G | 0.6259 | likely_pathogenic | 0.6369 | pathogenic | -0.399 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
K/H | 0.3991 | ambiguous | 0.4191 | ambiguous | -0.576 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | I |
K/I | 0.3603 | ambiguous | 0.4075 | ambiguous | 0.442 | Stabilizing | 1.0 | D | 0.814 | deleterious | N | 0.486345941 | None | None | I |
K/L | 0.3841 | ambiguous | 0.4227 | ambiguous | 0.442 | Stabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
K/M | 0.269 | likely_benign | 0.3112 | benign | 0.033 | Stabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
K/N | 0.5031 | ambiguous | 0.5585 | ambiguous | -0.062 | Destabilizing | 1.0 | D | 0.753 | deleterious | N | 0.509730115 | None | None | I |
K/P | 0.4095 | ambiguous | 0.4026 | ambiguous | 0.273 | Stabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | I |
K/Q | 0.1751 | likely_benign | 0.1911 | benign | -0.108 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | N | 0.52128982 | None | None | I |
K/R | 0.1068 | likely_benign | 0.1034 | benign | -0.141 | Destabilizing | 0.999 | D | 0.62 | neutral | N | 0.450197726 | None | None | I |
K/S | 0.4982 | ambiguous | 0.5397 | ambiguous | -0.548 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | I |
K/T | 0.2516 | likely_benign | 0.291 | benign | -0.313 | Destabilizing | 1.0 | D | 0.791 | deleterious | N | 0.467988196 | None | None | I |
K/V | 0.344 | ambiguous | 0.3849 | ambiguous | 0.273 | Stabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | I |
K/W | 0.8228 | likely_pathogenic | 0.8321 | pathogenic | -0.243 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
K/Y | 0.6744 | likely_pathogenic | 0.6849 | pathogenic | 0.099 | Stabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.