Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21099 | 63520;63521;63522 | chr2:178588112;178588111;178588110 | chr2:179452839;179452838;179452837 |
N2AB | 19458 | 58597;58598;58599 | chr2:178588112;178588111;178588110 | chr2:179452839;179452838;179452837 |
N2A | 18531 | 55816;55817;55818 | chr2:178588112;178588111;178588110 | chr2:179452839;179452838;179452837 |
N2B | 12034 | 36325;36326;36327 | chr2:178588112;178588111;178588110 | chr2:179452839;179452838;179452837 |
Novex-1 | 12159 | 36700;36701;36702 | chr2:178588112;178588111;178588110 | chr2:179452839;179452838;179452837 |
Novex-2 | 12226 | 36901;36902;36903 | chr2:178588112;178588111;178588110 | chr2:179452839;179452838;179452837 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1180774898 | -1.472 | 1.0 | D | 0.864 | 0.862 | 0.854735952166 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.62E-05 | None | 0 | None | 0 | 8.91E-06 | 0 |
Y/C | rs1180774898 | -1.472 | 1.0 | D | 0.864 | 0.862 | 0.854735952166 | gnomAD-4.0.0 | 3.18631E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78443E-05 | None | 0 | 0 | 0 | 0 | 3.02755E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9945 | likely_pathogenic | 0.9945 | pathogenic | -3.507 | Highly Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
Y/C | 0.8996 | likely_pathogenic | 0.9054 | pathogenic | -1.845 | Destabilizing | 1.0 | D | 0.864 | deleterious | D | 0.645320864 | None | None | N |
Y/D | 0.989 | likely_pathogenic | 0.989 | pathogenic | -3.926 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | D | 0.645522669 | None | None | N |
Y/E | 0.9979 | likely_pathogenic | 0.9978 | pathogenic | -3.706 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
Y/F | 0.2383 | likely_benign | 0.2508 | benign | -1.56 | Destabilizing | 0.999 | D | 0.649 | neutral | N | 0.521952016 | None | None | N |
Y/G | 0.9872 | likely_pathogenic | 0.9857 | pathogenic | -3.911 | Highly Destabilizing | 1.0 | D | 0.904 | deleterious | None | None | None | None | N |
Y/H | 0.9665 | likely_pathogenic | 0.9644 | pathogenic | -2.675 | Highly Destabilizing | 1.0 | D | 0.775 | deleterious | D | 0.629099699 | None | None | N |
Y/I | 0.9648 | likely_pathogenic | 0.9674 | pathogenic | -2.129 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
Y/K | 0.9982 | likely_pathogenic | 0.9981 | pathogenic | -2.622 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
Y/L | 0.9449 | likely_pathogenic | 0.9394 | pathogenic | -2.129 | Highly Destabilizing | 0.999 | D | 0.76 | deleterious | None | None | None | None | N |
Y/M | 0.9753 | likely_pathogenic | 0.9748 | pathogenic | -1.743 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
Y/N | 0.956 | likely_pathogenic | 0.9521 | pathogenic | -3.475 | Highly Destabilizing | 1.0 | D | 0.89 | deleterious | D | 0.645522669 | None | None | N |
Y/P | 0.9986 | likely_pathogenic | 0.9986 | pathogenic | -2.609 | Highly Destabilizing | 1.0 | D | 0.916 | deleterious | None | None | None | None | N |
Y/Q | 0.9976 | likely_pathogenic | 0.9974 | pathogenic | -3.186 | Highly Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
Y/R | 0.9947 | likely_pathogenic | 0.9943 | pathogenic | -2.43 | Highly Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
Y/S | 0.977 | likely_pathogenic | 0.9762 | pathogenic | -3.734 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | D | 0.645522669 | None | None | N |
Y/T | 0.9921 | likely_pathogenic | 0.9919 | pathogenic | -3.396 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
Y/V | 0.9456 | likely_pathogenic | 0.9502 | pathogenic | -2.609 | Highly Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
Y/W | 0.7524 | likely_pathogenic | 0.7611 | pathogenic | -0.819 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.