Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21103 | 63532;63533;63534 | chr2:178588100;178588099;178588098 | chr2:179452827;179452826;179452825 |
N2AB | 19462 | 58609;58610;58611 | chr2:178588100;178588099;178588098 | chr2:179452827;179452826;179452825 |
N2A | 18535 | 55828;55829;55830 | chr2:178588100;178588099;178588098 | chr2:179452827;179452826;179452825 |
N2B | 12038 | 36337;36338;36339 | chr2:178588100;178588099;178588098 | chr2:179452827;179452826;179452825 |
Novex-1 | 12163 | 36712;36713;36714 | chr2:178588100;178588099;178588098 | chr2:179452827;179452826;179452825 |
Novex-2 | 12230 | 36913;36914;36915 | chr2:178588100;178588099;178588098 | chr2:179452827;179452826;179452825 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | rs538999642 | -0.213 | 0.004 | N | 0.243 | 0.107 | 0.308278614506 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
M/I | rs538999642 | -0.213 | 0.004 | N | 0.243 | 0.107 | 0.308278614506 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
M/I | rs538999642 | -0.213 | 0.004 | N | 0.243 | 0.107 | 0.308278614506 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 1.4E-03 | None | None | 0 | 0 | None | None | None | 0 | None |
M/I | rs538999642 | -0.213 | 0.004 | N | 0.243 | 0.107 | 0.308278614506 | gnomAD-4.0.0 | 6.57229E-06 | None | None | None | None | N | None | 0 | 6.5445E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
M/T | rs770900534 | -1.806 | 0.549 | N | 0.589 | 0.221 | 0.514923749907 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
M/T | rs770900534 | -1.806 | 0.549 | N | 0.589 | 0.221 | 0.514923749907 | gnomAD-4.0.0 | 1.59315E-06 | None | None | None | None | N | None | 0 | 2.28822E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
M/V | rs1444195248 | -0.704 | 0.036 | N | 0.367 | 0.094 | 0.303781844768 | gnomAD-2.1.1 | 7.16E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.57E-05 | 0 |
M/V | rs1444195248 | -0.704 | 0.036 | N | 0.367 | 0.094 | 0.303781844768 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
M/V | rs1444195248 | -0.704 | 0.036 | N | 0.367 | 0.094 | 0.303781844768 | gnomAD-4.0.0 | 2.4802E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.64745E-04 | 8.47975E-07 | 0 | 3.20441E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.6342 | likely_pathogenic | 0.6293 | pathogenic | -2.19 | Highly Destabilizing | 0.4 | N | 0.515 | neutral | None | None | None | None | N |
M/C | 0.6907 | likely_pathogenic | 0.687 | pathogenic | -2.262 | Highly Destabilizing | 0.992 | D | 0.706 | prob.neutral | None | None | None | None | N |
M/D | 0.9781 | likely_pathogenic | 0.9819 | pathogenic | -2.201 | Highly Destabilizing | 0.972 | D | 0.731 | prob.delet. | None | None | None | None | N |
M/E | 0.7768 | likely_pathogenic | 0.7744 | pathogenic | -1.936 | Destabilizing | 0.972 | D | 0.679 | prob.neutral | None | None | None | None | N |
M/F | 0.3254 | likely_benign | 0.3246 | benign | -0.769 | Destabilizing | 0.617 | D | 0.587 | neutral | None | None | None | None | N |
M/G | 0.8427 | likely_pathogenic | 0.8533 | pathogenic | -2.687 | Highly Destabilizing | 0.766 | D | 0.695 | prob.neutral | None | None | None | None | N |
M/H | 0.7311 | likely_pathogenic | 0.7178 | pathogenic | -2.419 | Highly Destabilizing | 0.992 | D | 0.73 | prob.delet. | None | None | None | None | N |
M/I | 0.4251 | ambiguous | 0.4529 | ambiguous | -0.737 | Destabilizing | 0.004 | N | 0.243 | neutral | N | 0.461470726 | None | None | N |
M/K | 0.3199 | likely_benign | 0.2892 | benign | -1.389 | Destabilizing | 0.712 | D | 0.584 | neutral | N | 0.445213194 | None | None | N |
M/L | 0.206 | likely_benign | 0.2296 | benign | -0.737 | Destabilizing | 0.001 | N | 0.165 | neutral | N | 0.462950806 | None | None | N |
M/N | 0.8454 | likely_pathogenic | 0.8535 | pathogenic | -1.897 | Destabilizing | 0.972 | D | 0.697 | prob.neutral | None | None | None | None | N |
M/P | 0.9954 | likely_pathogenic | 0.9967 | pathogenic | -1.207 | Destabilizing | 0.972 | D | 0.698 | prob.neutral | None | None | None | None | N |
M/Q | 0.4179 | ambiguous | 0.383 | ambiguous | -1.518 | Destabilizing | 0.972 | D | 0.607 | neutral | None | None | None | None | N |
M/R | 0.4069 | ambiguous | 0.3578 | ambiguous | -1.61 | Destabilizing | 0.963 | D | 0.677 | prob.neutral | N | 0.430110456 | None | None | N |
M/S | 0.6703 | likely_pathogenic | 0.673 | pathogenic | -2.391 | Highly Destabilizing | 0.766 | D | 0.575 | neutral | None | None | None | None | N |
M/T | 0.5197 | ambiguous | 0.5278 | ambiguous | -1.994 | Destabilizing | 0.549 | D | 0.589 | neutral | N | 0.488387968 | None | None | N |
M/V | 0.1487 | likely_benign | 0.1554 | benign | -1.207 | Destabilizing | 0.036 | N | 0.367 | neutral | N | 0.491502844 | None | None | N |
M/W | 0.699 | likely_pathogenic | 0.701 | pathogenic | -1.15 | Destabilizing | 0.992 | D | 0.708 | prob.delet. | None | None | None | None | N |
M/Y | 0.5204 | ambiguous | 0.5123 | ambiguous | -1.111 | Destabilizing | 0.92 | D | 0.678 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.