Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21105 | 63538;63539;63540 | chr2:178588094;178588093;178588092 | chr2:179452821;179452820;179452819 |
N2AB | 19464 | 58615;58616;58617 | chr2:178588094;178588093;178588092 | chr2:179452821;179452820;179452819 |
N2A | 18537 | 55834;55835;55836 | chr2:178588094;178588093;178588092 | chr2:179452821;179452820;179452819 |
N2B | 12040 | 36343;36344;36345 | chr2:178588094;178588093;178588092 | chr2:179452821;179452820;179452819 |
Novex-1 | 12165 | 36718;36719;36720 | chr2:178588094;178588093;178588092 | chr2:179452821;179452820;179452819 |
Novex-2 | 12232 | 36919;36920;36921 | chr2:178588094;178588093;178588092 | chr2:179452821;179452820;179452819 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs773378006 | -0.522 | 0.003 | N | 0.371 | 0.161 | 0.370608029945 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.62E-05 | None | 0 | None | 0 | 0 | 0 |
P/L | rs773378006 | -0.522 | 0.003 | N | 0.371 | 0.161 | 0.370608029945 | gnomAD-4.0.0 | 4.77937E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.56917E-05 | None | 1.88288E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1047 | likely_benign | 0.1073 | benign | -1.547 | Destabilizing | 0.684 | D | 0.417 | neutral | N | 0.472421225 | None | None | N |
P/C | 0.49 | ambiguous | 0.4995 | ambiguous | -0.838 | Destabilizing | 0.996 | D | 0.672 | neutral | None | None | None | None | N |
P/D | 0.4268 | ambiguous | 0.4414 | ambiguous | -1.508 | Destabilizing | 0.009 | N | 0.339 | neutral | None | None | None | None | N |
P/E | 0.2059 | likely_benign | 0.2031 | benign | -1.475 | Destabilizing | 0.59 | D | 0.415 | neutral | None | None | None | None | N |
P/F | 0.6017 | likely_pathogenic | 0.5882 | pathogenic | -1.087 | Destabilizing | 0.91 | D | 0.673 | neutral | None | None | None | None | N |
P/G | 0.2761 | likely_benign | 0.2875 | benign | -1.892 | Destabilizing | 0.742 | D | 0.529 | neutral | None | None | None | None | N |
P/H | 0.2228 | likely_benign | 0.2207 | benign | -1.457 | Destabilizing | 0.996 | D | 0.613 | neutral | None | None | None | None | N |
P/I | 0.3658 | ambiguous | 0.3716 | ambiguous | -0.678 | Destabilizing | 0.59 | D | 0.553 | neutral | None | None | None | None | N |
P/K | 0.1873 | likely_benign | 0.1818 | benign | -1.334 | Destabilizing | 0.742 | D | 0.483 | neutral | None | None | None | None | N |
P/L | 0.1373 | likely_benign | 0.1406 | benign | -0.678 | Destabilizing | 0.003 | N | 0.371 | neutral | N | 0.443485185 | None | None | N |
P/M | 0.3283 | likely_benign | 0.3321 | benign | -0.451 | Destabilizing | 0.91 | D | 0.623 | neutral | None | None | None | None | N |
P/N | 0.3273 | likely_benign | 0.3271 | benign | -1.14 | Destabilizing | 0.91 | D | 0.583 | neutral | None | None | None | None | N |
P/Q | 0.1186 | likely_benign | 0.1174 | benign | -1.272 | Destabilizing | 0.939 | D | 0.559 | neutral | N | 0.461510798 | None | None | N |
P/R | 0.1482 | likely_benign | 0.1463 | benign | -0.817 | Destabilizing | 0.939 | D | 0.624 | neutral | N | 0.464052458 | None | None | N |
P/S | 0.148 | likely_benign | 0.1502 | benign | -1.644 | Destabilizing | 0.684 | D | 0.453 | neutral | N | 0.45835585 | None | None | N |
P/T | 0.1435 | likely_benign | 0.1502 | benign | -1.507 | Destabilizing | 0.684 | D | 0.459 | neutral | N | 0.446312059 | None | None | N |
P/V | 0.2334 | likely_benign | 0.2397 | benign | -0.934 | Destabilizing | 0.59 | D | 0.494 | neutral | None | None | None | None | N |
P/W | 0.6175 | likely_pathogenic | 0.6288 | pathogenic | -1.356 | Destabilizing | 0.996 | D | 0.725 | prob.delet. | None | None | None | None | N |
P/Y | 0.4952 | ambiguous | 0.496 | ambiguous | -1.056 | Destabilizing | 0.953 | D | 0.673 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.