Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21117 | 63574;63575;63576 | chr2:178588058;178588057;178588056 | chr2:179452785;179452784;179452783 |
N2AB | 19476 | 58651;58652;58653 | chr2:178588058;178588057;178588056 | chr2:179452785;179452784;179452783 |
N2A | 18549 | 55870;55871;55872 | chr2:178588058;178588057;178588056 | chr2:179452785;179452784;179452783 |
N2B | 12052 | 36379;36380;36381 | chr2:178588058;178588057;178588056 | chr2:179452785;179452784;179452783 |
Novex-1 | 12177 | 36754;36755;36756 | chr2:178588058;178588057;178588056 | chr2:179452785;179452784;179452783 |
Novex-2 | 12244 | 36955;36956;36957 | chr2:178588058;178588057;178588056 | chr2:179452785;179452784;179452783 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1400590737 | 0.43 | 0.999 | N | 0.623 | 0.398 | 0.380901646489 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
K/E | rs1400590737 | 0.43 | 0.999 | N | 0.623 | 0.398 | 0.380901646489 | gnomAD-4.0.0 | 1.59297E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43353E-05 | 0 |
K/Q | None | None | 1.0 | N | 0.674 | 0.378 | 0.223847106136 | gnomAD-4.0.0 | 1.59297E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86128E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4833 | ambiguous | 0.5027 | ambiguous | -0.123 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | N |
K/C | 0.6802 | likely_pathogenic | 0.6852 | pathogenic | -0.133 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
K/D | 0.7359 | likely_pathogenic | 0.7504 | pathogenic | -0.012 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
K/E | 0.2034 | likely_benign | 0.2069 | benign | 0.047 | Stabilizing | 0.999 | D | 0.623 | neutral | N | 0.48731332 | None | None | N |
K/F | 0.723 | likely_pathogenic | 0.7454 | pathogenic | 0.009 | Stabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
K/G | 0.6119 | likely_pathogenic | 0.6362 | pathogenic | -0.413 | Destabilizing | 1.0 | D | 0.638 | neutral | None | None | None | None | N |
K/H | 0.3034 | likely_benign | 0.2996 | benign | -0.69 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
K/I | 0.2772 | likely_benign | 0.2928 | benign | 0.59 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | N | 0.444946622 | None | None | N |
K/L | 0.3325 | likely_benign | 0.345 | ambiguous | 0.59 | Stabilizing | 1.0 | D | 0.638 | neutral | None | None | None | None | N |
K/M | 0.2274 | likely_benign | 0.2401 | benign | 0.269 | Stabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
K/N | 0.5195 | ambiguous | 0.5376 | ambiguous | 0.06 | Stabilizing | 1.0 | D | 0.701 | prob.neutral | N | 0.516190645 | None | None | N |
K/P | 0.939 | likely_pathogenic | 0.9435 | pathogenic | 0.382 | Stabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | N |
K/Q | 0.1184 | likely_benign | 0.1165 | benign | -0.02 | Destabilizing | 1.0 | D | 0.674 | neutral | N | 0.463222952 | None | None | N |
K/R | 0.0898 | likely_benign | 0.0879 | benign | -0.273 | Destabilizing | 0.999 | D | 0.578 | neutral | N | 0.459684001 | None | None | N |
K/S | 0.532 | ambiguous | 0.5465 | ambiguous | -0.416 | Destabilizing | 0.999 | D | 0.668 | neutral | None | None | None | None | N |
K/T | 0.2105 | likely_benign | 0.2228 | benign | -0.186 | Destabilizing | 1.0 | D | 0.656 | neutral | N | 0.442714394 | None | None | N |
K/V | 0.2673 | likely_benign | 0.28 | benign | 0.382 | Stabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
K/W | 0.7289 | likely_pathogenic | 0.74 | pathogenic | 0.013 | Stabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
K/Y | 0.6187 | likely_pathogenic | 0.6301 | pathogenic | 0.307 | Stabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.