Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21118 | 63577;63578;63579 | chr2:178588055;178588054;178588053 | chr2:179452782;179452781;179452780 |
N2AB | 19477 | 58654;58655;58656 | chr2:178588055;178588054;178588053 | chr2:179452782;179452781;179452780 |
N2A | 18550 | 55873;55874;55875 | chr2:178588055;178588054;178588053 | chr2:179452782;179452781;179452780 |
N2B | 12053 | 36382;36383;36384 | chr2:178588055;178588054;178588053 | chr2:179452782;179452781;179452780 |
Novex-1 | 12178 | 36757;36758;36759 | chr2:178588055;178588054;178588053 | chr2:179452782;179452781;179452780 |
Novex-2 | 12245 | 36958;36959;36960 | chr2:178588055;178588054;178588053 | chr2:179452782;179452781;179452780 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.996 | N | 0.608 | 0.416 | 0.593399868425 | gnomAD-4.0.0 | 6.84526E-07 | None | None | None | None | N | None | 2.99115E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/Q | rs755796313 | -0.256 | 0.999 | N | 0.624 | 0.314 | 0.223847106136 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 8.92E-06 | 0 |
R/Q | rs755796313 | -0.256 | 0.999 | N | 0.624 | 0.314 | 0.223847106136 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07469E-04 | 0 |
R/Q | rs755796313 | -0.256 | 0.999 | N | 0.624 | 0.314 | 0.223847106136 | gnomAD-4.0.0 | 1.11605E-05 | None | None | None | None | N | None | 0 | 0 | None | 3.38089E-05 | 0 | None | 0 | 0 | 1.27188E-05 | 2.19703E-05 | 0 |
R/W | rs200726948 | -0.371 | 1.0 | N | 0.715 | 0.491 | 0.433600339574 | gnomAD-2.1.1 | 2.90054E-04 | None | None | None | None | N | None | 2.06868E-04 | 2.83E-05 | None | 0 | 1.44928E-03 | None | 2.61575E-04 | None | 7.99936E-04 | 1.01988E-04 | 8.43882E-04 |
R/W | rs200726948 | -0.371 | 1.0 | N | 0.715 | 0.491 | 0.433600339574 | gnomAD-3.1.2 | 1.77695E-04 | None | None | None | None | N | None | 1.44942E-04 | 0 | 0 | 0 | 1.55642E-03 | None | 4.70987E-04 | 0 | 1.03011E-04 | 2.07469E-04 | 0 |
R/W | rs200726948 | -0.371 | 1.0 | N | 0.715 | 0.491 | 0.433600339574 | gnomAD-4.0.0 | 1.7113E-04 | None | None | None | None | N | None | 1.60368E-04 | 3.3379E-05 | None | 0 | 1.29795E-03 | None | 9.06278E-04 | 4.94071E-04 | 7.7161E-05 | 3.73479E-04 | 2.88341E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.6078 | likely_pathogenic | 0.4953 | ambiguous | -0.598 | Destabilizing | 0.983 | D | 0.537 | neutral | None | None | None | None | N |
R/C | 0.3244 | likely_benign | 0.2546 | benign | -0.476 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
R/D | 0.8954 | likely_pathogenic | 0.8454 | pathogenic | -0.116 | Destabilizing | 0.998 | D | 0.715 | prob.delet. | None | None | None | None | N |
R/E | 0.6202 | likely_pathogenic | 0.5283 | ambiguous | -0.016 | Destabilizing | 0.983 | D | 0.472 | neutral | None | None | None | None | N |
R/F | 0.731 | likely_pathogenic | 0.645 | pathogenic | -0.585 | Destabilizing | 0.999 | D | 0.734 | prob.delet. | None | None | None | None | N |
R/G | 0.5785 | likely_pathogenic | 0.4841 | ambiguous | -0.883 | Destabilizing | 0.996 | D | 0.608 | neutral | N | 0.466279903 | None | None | N |
R/H | 0.2053 | likely_benign | 0.1704 | benign | -1.29 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
R/I | 0.3543 | ambiguous | 0.2846 | benign | 0.154 | Stabilizing | 0.999 | D | 0.739 | prob.delet. | None | None | None | None | N |
R/K | 0.1396 | likely_benign | 0.1199 | benign | -0.665 | Destabilizing | 0.437 | N | 0.209 | neutral | None | None | None | None | N |
R/L | 0.3399 | likely_benign | 0.2703 | benign | 0.154 | Stabilizing | 0.996 | D | 0.608 | neutral | N | 0.489313475 | None | None | N |
R/M | 0.4462 | ambiguous | 0.3545 | ambiguous | -0.088 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
R/N | 0.814 | likely_pathogenic | 0.728 | pathogenic | -0.108 | Destabilizing | 0.998 | D | 0.627 | neutral | None | None | None | None | N |
R/P | 0.4651 | ambiguous | 0.3372 | benign | -0.075 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | N | 0.484483658 | None | None | N |
R/Q | 0.1687 | likely_benign | 0.1365 | benign | -0.307 | Destabilizing | 0.999 | D | 0.624 | neutral | N | 0.500490474 | None | None | N |
R/S | 0.7654 | likely_pathogenic | 0.6652 | pathogenic | -0.774 | Destabilizing | 0.983 | D | 0.63 | neutral | None | None | None | None | N |
R/T | 0.4777 | ambiguous | 0.3672 | ambiguous | -0.506 | Destabilizing | 0.998 | D | 0.676 | prob.neutral | None | None | None | None | N |
R/V | 0.4468 | ambiguous | 0.3658 | ambiguous | -0.075 | Destabilizing | 0.998 | D | 0.732 | prob.delet. | None | None | None | None | N |
R/W | 0.33 | likely_benign | 0.2713 | benign | -0.335 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | N | 0.503880765 | None | None | N |
R/Y | 0.5708 | likely_pathogenic | 0.478 | ambiguous | -0.008 | Destabilizing | 0.999 | D | 0.736 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.