Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21123 | 63592;63593;63594 | chr2:178588040;178588039;178588038 | chr2:179452767;179452766;179452765 |
N2AB | 19482 | 58669;58670;58671 | chr2:178588040;178588039;178588038 | chr2:179452767;179452766;179452765 |
N2A | 18555 | 55888;55889;55890 | chr2:178588040;178588039;178588038 | chr2:179452767;179452766;179452765 |
N2B | 12058 | 36397;36398;36399 | chr2:178588040;178588039;178588038 | chr2:179452767;179452766;179452765 |
Novex-1 | 12183 | 36772;36773;36774 | chr2:178588040;178588039;178588038 | chr2:179452767;179452766;179452765 |
Novex-2 | 12250 | 36973;36974;36975 | chr2:178588040;178588039;178588038 | chr2:179452767;179452766;179452765 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs754944741 | -0.3 | 0.925 | N | 0.322 | 0.258 | 0.253726318573 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
A/T | rs754944741 | -0.3 | 0.925 | N | 0.322 | 0.258 | 0.253726318573 | gnomAD-4.0.0 | 1.59292E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43345E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4518 | ambiguous | 0.4204 | ambiguous | -0.785 | Destabilizing | 1.0 | D | 0.312 | neutral | None | None | None | None | I |
A/D | 0.3905 | ambiguous | 0.338 | benign | -0.446 | Destabilizing | 0.991 | D | 0.401 | neutral | None | None | None | None | I |
A/E | 0.3224 | likely_benign | 0.2859 | benign | -0.6 | Destabilizing | 0.961 | D | 0.333 | neutral | N | 0.47776833 | None | None | I |
A/F | 0.3659 | ambiguous | 0.3523 | ambiguous | -0.889 | Destabilizing | 0.999 | D | 0.5 | neutral | None | None | None | None | I |
A/G | 0.1348 | likely_benign | 0.121 | benign | -0.268 | Destabilizing | 0.031 | N | 0.13 | neutral | N | 0.432918688 | None | None | I |
A/H | 0.4785 | ambiguous | 0.4438 | ambiguous | -0.277 | Destabilizing | 1.0 | D | 0.499 | neutral | None | None | None | None | I |
A/I | 0.2775 | likely_benign | 0.2564 | benign | -0.352 | Destabilizing | 0.996 | D | 0.337 | neutral | None | None | None | None | I |
A/K | 0.483 | ambiguous | 0.4466 | ambiguous | -0.559 | Destabilizing | 0.991 | D | 0.327 | neutral | None | None | None | None | I |
A/L | 0.1755 | likely_benign | 0.1753 | benign | -0.352 | Destabilizing | 0.985 | D | 0.338 | neutral | None | None | None | None | I |
A/M | 0.2391 | likely_benign | 0.2385 | benign | -0.466 | Destabilizing | 1.0 | D | 0.359 | neutral | None | None | None | None | I |
A/N | 0.2332 | likely_benign | 0.2163 | benign | -0.245 | Destabilizing | 0.991 | D | 0.407 | neutral | None | None | None | None | I |
A/P | 0.188 | likely_benign | 0.1632 | benign | -0.283 | Destabilizing | 0.994 | D | 0.341 | neutral | N | 0.426859507 | None | None | I |
A/Q | 0.3222 | likely_benign | 0.2965 | benign | -0.518 | Destabilizing | 0.996 | D | 0.335 | neutral | None | None | None | None | I |
A/R | 0.4453 | ambiguous | 0.4073 | ambiguous | -0.106 | Destabilizing | 0.996 | D | 0.335 | neutral | None | None | None | None | I |
A/S | 0.0917 | likely_benign | 0.0864 | benign | -0.438 | Destabilizing | 0.489 | N | 0.211 | neutral | N | 0.453795392 | None | None | I |
A/T | 0.0867 | likely_benign | 0.0872 | benign | -0.513 | Destabilizing | 0.925 | D | 0.322 | neutral | N | 0.425726143 | None | None | I |
A/V | 0.1432 | likely_benign | 0.1359 | benign | -0.283 | Destabilizing | 0.98 | D | 0.329 | neutral | N | 0.463340382 | None | None | I |
A/W | 0.7199 | likely_pathogenic | 0.6881 | pathogenic | -1.009 | Destabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | I |
A/Y | 0.4972 | ambiguous | 0.4609 | ambiguous | -0.67 | Destabilizing | 0.999 | D | 0.494 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.