Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2113 | 6562;6563;6564 | chr2:178775527;178775526;178775525 | chr2:179640254;179640253;179640252 |
N2AB | 2113 | 6562;6563;6564 | chr2:178775527;178775526;178775525 | chr2:179640254;179640253;179640252 |
N2A | 2113 | 6562;6563;6564 | chr2:178775527;178775526;178775525 | chr2:179640254;179640253;179640252 |
N2B | 2067 | 6424;6425;6426 | chr2:178775527;178775526;178775525 | chr2:179640254;179640253;179640252 |
Novex-1 | 2067 | 6424;6425;6426 | chr2:178775527;178775526;178775525 | chr2:179640254;179640253;179640252 |
Novex-2 | 2067 | 6424;6425;6426 | chr2:178775527;178775526;178775525 | chr2:179640254;179640253;179640252 |
Novex-3 | 2113 | 6562;6563;6564 | chr2:178775527;178775526;178775525 | chr2:179640254;179640253;179640252 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1574647040 | None | 0.822 | D | 0.497 | 0.822 | 0.502379540653 | gnomAD-4.0.0 | 1.59076E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8566E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9275 | likely_pathogenic | 0.9352 | pathogenic | -0.781 | Destabilizing | 0.86 | D | 0.534 | neutral | None | None | None | None | N |
K/C | 0.8827 | likely_pathogenic | 0.9021 | pathogenic | -0.978 | Destabilizing | 0.998 | D | 0.793 | deleterious | None | None | None | None | N |
K/D | 0.992 | likely_pathogenic | 0.9924 | pathogenic | -0.386 | Destabilizing | 0.915 | D | 0.605 | neutral | None | None | None | None | N |
K/E | 0.8347 | likely_pathogenic | 0.8409 | pathogenic | -0.269 | Destabilizing | 0.822 | D | 0.497 | neutral | D | 0.722158998 | None | None | N |
K/F | 0.9654 | likely_pathogenic | 0.9672 | pathogenic | -0.694 | Destabilizing | 0.998 | D | 0.812 | deleterious | None | None | None | None | N |
K/G | 0.9719 | likely_pathogenic | 0.9731 | pathogenic | -1.137 | Destabilizing | 0.754 | D | 0.619 | neutral | None | None | None | None | N |
K/H | 0.5914 | likely_pathogenic | 0.6207 | pathogenic | -1.608 | Destabilizing | 0.956 | D | 0.687 | prob.neutral | None | None | None | None | N |
K/I | 0.7872 | likely_pathogenic | 0.8048 | pathogenic | 0.14 | Stabilizing | 0.971 | D | 0.807 | deleterious | D | 0.594661681 | None | None | N |
K/L | 0.7724 | likely_pathogenic | 0.792 | pathogenic | 0.14 | Stabilizing | 0.956 | D | 0.658 | neutral | None | None | None | None | N |
K/M | 0.7063 | likely_pathogenic | 0.7257 | pathogenic | 0.1 | Stabilizing | 0.998 | D | 0.675 | prob.neutral | None | None | None | None | N |
K/N | 0.9626 | likely_pathogenic | 0.9652 | pathogenic | -0.684 | Destabilizing | 0.032 | N | 0.389 | neutral | D | 0.684972026 | None | None | N |
K/P | 0.9981 | likely_pathogenic | 0.9983 | pathogenic | -0.138 | Destabilizing | 0.978 | D | 0.655 | neutral | None | None | None | None | N |
K/Q | 0.3333 | likely_benign | 0.3548 | ambiguous | -0.792 | Destabilizing | 0.942 | D | 0.535 | neutral | D | 0.673786874 | None | None | N |
K/R | 0.082 | likely_benign | 0.0815 | benign | -0.695 | Destabilizing | 0.014 | N | 0.435 | neutral | N | 0.521760456 | None | None | N |
K/S | 0.9496 | likely_pathogenic | 0.954 | pathogenic | -1.387 | Destabilizing | 0.754 | D | 0.487 | neutral | None | None | None | None | N |
K/T | 0.8447 | likely_pathogenic | 0.8586 | pathogenic | -1.056 | Destabilizing | 0.822 | D | 0.597 | neutral | D | 0.722686933 | None | None | N |
K/V | 0.7588 | likely_pathogenic | 0.78 | pathogenic | -0.138 | Destabilizing | 0.978 | D | 0.705 | prob.neutral | None | None | None | None | N |
K/W | 0.9228 | likely_pathogenic | 0.9227 | pathogenic | -0.557 | Destabilizing | 0.998 | D | 0.76 | deleterious | None | None | None | None | N |
K/Y | 0.9038 | likely_pathogenic | 0.9097 | pathogenic | -0.205 | Destabilizing | 0.993 | D | 0.757 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.