Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21130 | 63613;63614;63615 | chr2:178588019;178588018;178588017 | chr2:179452746;179452745;179452744 |
N2AB | 19489 | 58690;58691;58692 | chr2:178588019;178588018;178588017 | chr2:179452746;179452745;179452744 |
N2A | 18562 | 55909;55910;55911 | chr2:178588019;178588018;178588017 | chr2:179452746;179452745;179452744 |
N2B | 12065 | 36418;36419;36420 | chr2:178588019;178588018;178588017 | chr2:179452746;179452745;179452744 |
Novex-1 | 12190 | 36793;36794;36795 | chr2:178588019;178588018;178588017 | chr2:179452746;179452745;179452744 |
Novex-2 | 12257 | 36994;36995;36996 | chr2:178588019;178588018;178588017 | chr2:179452746;179452745;179452744 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs1389556175 | None | 0.885 | N | 0.493 | 0.321 | 0.276898752692 | gnomAD-4.0.0 | 2.05369E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69928E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9431 | likely_pathogenic | 0.9445 | pathogenic | -2.373 | Highly Destabilizing | 0.953 | D | 0.533 | neutral | None | None | None | None | I |
F/C | 0.6928 | likely_pathogenic | 0.7038 | pathogenic | -1.457 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | N | 0.491815062 | None | None | I |
F/D | 0.9766 | likely_pathogenic | 0.9793 | pathogenic | -1.971 | Destabilizing | 0.998 | D | 0.744 | deleterious | None | None | None | None | I |
F/E | 0.9791 | likely_pathogenic | 0.9798 | pathogenic | -1.812 | Destabilizing | 0.993 | D | 0.715 | prob.delet. | None | None | None | None | I |
F/G | 0.9647 | likely_pathogenic | 0.9693 | pathogenic | -2.777 | Highly Destabilizing | 0.993 | D | 0.661 | neutral | None | None | None | None | I |
F/H | 0.8682 | likely_pathogenic | 0.8685 | pathogenic | -1.113 | Destabilizing | 0.986 | D | 0.621 | neutral | None | None | None | None | I |
F/I | 0.6495 | likely_pathogenic | 0.6535 | pathogenic | -1.105 | Destabilizing | 0.982 | D | 0.483 | neutral | N | 0.517788155 | None | None | I |
F/K | 0.978 | likely_pathogenic | 0.9792 | pathogenic | -1.743 | Destabilizing | 0.993 | D | 0.721 | prob.delet. | None | None | None | None | I |
F/L | 0.9608 | likely_pathogenic | 0.9601 | pathogenic | -1.105 | Destabilizing | 0.885 | D | 0.493 | neutral | N | 0.491620274 | None | None | I |
F/M | 0.7926 | likely_pathogenic | 0.7799 | pathogenic | -0.79 | Destabilizing | 0.999 | D | 0.525 | neutral | None | None | None | None | I |
F/N | 0.9376 | likely_pathogenic | 0.9431 | pathogenic | -2.059 | Highly Destabilizing | 0.998 | D | 0.762 | deleterious | None | None | None | None | I |
F/P | 0.9996 | likely_pathogenic | 0.9997 | pathogenic | -1.529 | Destabilizing | 0.998 | D | 0.768 | deleterious | None | None | None | None | I |
F/Q | 0.9662 | likely_pathogenic | 0.967 | pathogenic | -2.033 | Highly Destabilizing | 0.998 | D | 0.767 | deleterious | None | None | None | None | I |
F/R | 0.9613 | likely_pathogenic | 0.963 | pathogenic | -1.194 | Destabilizing | 0.993 | D | 0.762 | deleterious | None | None | None | None | I |
F/S | 0.9331 | likely_pathogenic | 0.936 | pathogenic | -2.783 | Highly Destabilizing | 0.991 | D | 0.619 | neutral | N | 0.484753006 | None | None | I |
F/T | 0.9486 | likely_pathogenic | 0.9495 | pathogenic | -2.517 | Highly Destabilizing | 0.993 | D | 0.64 | neutral | None | None | None | None | I |
F/V | 0.6747 | likely_pathogenic | 0.6807 | pathogenic | -1.529 | Destabilizing | 0.939 | D | 0.482 | neutral | N | 0.502930559 | None | None | I |
F/W | 0.6459 | likely_pathogenic | 0.6911 | pathogenic | -0.254 | Destabilizing | 0.998 | D | 0.517 | neutral | None | None | None | None | I |
F/Y | 0.1573 | likely_benign | 0.1709 | benign | -0.548 | Destabilizing | 0.02 | N | 0.235 | neutral | N | 0.411060548 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.