Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21134 | 63625;63626;63627 | chr2:178588007;178588006;178588005 | chr2:179452734;179452733;179452732 |
N2AB | 19493 | 58702;58703;58704 | chr2:178588007;178588006;178588005 | chr2:179452734;179452733;179452732 |
N2A | 18566 | 55921;55922;55923 | chr2:178588007;178588006;178588005 | chr2:179452734;179452733;179452732 |
N2B | 12069 | 36430;36431;36432 | chr2:178588007;178588006;178588005 | chr2:179452734;179452733;179452732 |
Novex-1 | 12194 | 36805;36806;36807 | chr2:178588007;178588006;178588005 | chr2:179452734;179452733;179452732 |
Novex-2 | 12261 | 37006;37007;37008 | chr2:178588007;178588006;178588005 | chr2:179452734;179452733;179452732 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/I | None | None | 0.996 | N | 0.423 | 0.32 | 0.430579932962 | gnomAD-4.0.0 | 1.59341E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43361E-05 | 0 |
S/N | None | None | 0.134 | N | 0.149 | 0.121 | 0.0611884634855 | gnomAD-4.0.0 | 1.59341E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86139E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.08 | likely_benign | 0.0806 | benign | -0.163 | Destabilizing | 0.863 | D | 0.341 | neutral | None | None | None | None | N |
S/C | 0.1316 | likely_benign | 0.1301 | benign | -0.261 | Destabilizing | 0.999 | D | 0.415 | neutral | N | 0.463236531 | None | None | N |
S/D | 0.2684 | likely_benign | 0.2582 | benign | 0.071 | Stabilizing | 0.759 | D | 0.306 | neutral | None | None | None | None | N |
S/E | 0.434 | ambiguous | 0.4141 | ambiguous | -0.032 | Destabilizing | 0.17 | N | 0.11 | neutral | None | None | None | None | N |
S/F | 0.235 | likely_benign | 0.2416 | benign | -0.861 | Destabilizing | 0.997 | D | 0.41 | neutral | None | None | None | None | N |
S/G | 0.0792 | likely_benign | 0.0766 | benign | -0.231 | Destabilizing | 0.826 | D | 0.306 | neutral | N | 0.334391197 | None | None | N |
S/H | 0.3162 | likely_benign | 0.2927 | benign | -0.559 | Destabilizing | 0.991 | D | 0.412 | neutral | None | None | None | None | N |
S/I | 0.2659 | likely_benign | 0.2921 | benign | -0.118 | Destabilizing | 0.996 | D | 0.423 | neutral | N | 0.505597144 | None | None | N |
S/K | 0.6031 | likely_pathogenic | 0.5725 | pathogenic | -0.359 | Destabilizing | 0.759 | D | 0.303 | neutral | None | None | None | None | N |
S/L | 0.1227 | likely_benign | 0.1235 | benign | -0.118 | Destabilizing | 0.939 | D | 0.349 | neutral | None | None | None | None | N |
S/M | 0.2059 | likely_benign | 0.2105 | benign | -0.089 | Destabilizing | 0.997 | D | 0.408 | neutral | None | None | None | None | N |
S/N | 0.1215 | likely_benign | 0.1161 | benign | -0.056 | Destabilizing | 0.134 | N | 0.149 | neutral | N | 0.366757119 | None | None | N |
S/P | 0.3817 | ambiguous | 0.4076 | ambiguous | -0.107 | Destabilizing | 0.997 | D | 0.427 | neutral | None | None | None | None | N |
S/Q | 0.4571 | ambiguous | 0.4274 | ambiguous | -0.288 | Destabilizing | 0.2 | N | 0.115 | neutral | None | None | None | None | N |
S/R | 0.5811 | likely_pathogenic | 0.546 | ambiguous | -0.091 | Destabilizing | 0.92 | D | 0.411 | neutral | N | 0.450954583 | None | None | N |
S/T | 0.0992 | likely_benign | 0.1064 | benign | -0.165 | Destabilizing | 0.826 | D | 0.318 | neutral | N | 0.491339768 | None | None | N |
S/V | 0.2334 | likely_benign | 0.2456 | benign | -0.107 | Destabilizing | 0.969 | D | 0.391 | neutral | None | None | None | None | N |
S/W | 0.384 | ambiguous | 0.3901 | ambiguous | -0.942 | Destabilizing | 0.999 | D | 0.502 | neutral | None | None | None | None | N |
S/Y | 0.187 | likely_benign | 0.1902 | benign | -0.624 | Destabilizing | 0.997 | D | 0.423 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.