Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21135 | 63628;63629;63630 | chr2:178588004;178588003;178588002 | chr2:179452731;179452730;179452729 |
N2AB | 19494 | 58705;58706;58707 | chr2:178588004;178588003;178588002 | chr2:179452731;179452730;179452729 |
N2A | 18567 | 55924;55925;55926 | chr2:178588004;178588003;178588002 | chr2:179452731;179452730;179452729 |
N2B | 12070 | 36433;36434;36435 | chr2:178588004;178588003;178588002 | chr2:179452731;179452730;179452729 |
Novex-1 | 12195 | 36808;36809;36810 | chr2:178588004;178588003;178588002 | chr2:179452731;179452730;179452729 |
Novex-2 | 12262 | 37009;37010;37011 | chr2:178588004;178588003;178588002 | chr2:179452731;179452730;179452729 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs1218574817 | -2.054 | 0.999 | D | 0.843 | 0.659 | 0.699352526576 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
L/V | rs1218574817 | -2.054 | 0.999 | D | 0.843 | 0.659 | 0.699352526576 | gnomAD-4.0.0 | 4.78037E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86133E-06 | 1.43365E-05 | 3.02847E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8712 | likely_pathogenic | 0.8978 | pathogenic | -2.635 | Highly Destabilizing | 0.999 | D | 0.782 | deleterious | None | None | None | None | N |
L/C | 0.88 | likely_pathogenic | 0.9084 | pathogenic | -2.142 | Highly Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
L/D | 0.9976 | likely_pathogenic | 0.9983 | pathogenic | -2.772 | Highly Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
L/E | 0.9866 | likely_pathogenic | 0.9889 | pathogenic | -2.578 | Highly Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
L/F | 0.762 | likely_pathogenic | 0.782 | pathogenic | -1.765 | Destabilizing | 1.0 | D | 0.828 | deleterious | D | 0.63943813 | None | None | N |
L/G | 0.9766 | likely_pathogenic | 0.981 | pathogenic | -3.168 | Highly Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
L/H | 0.9761 | likely_pathogenic | 0.9813 | pathogenic | -2.549 | Highly Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
L/I | 0.2577 | likely_benign | 0.2942 | benign | -1.106 | Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | N |
L/K | 0.973 | likely_pathogenic | 0.9776 | pathogenic | -1.95 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
L/M | 0.3686 | ambiguous | 0.3872 | ambiguous | -1.07 | Destabilizing | 1.0 | D | 0.8 | deleterious | D | 0.595326846 | None | None | N |
L/N | 0.9879 | likely_pathogenic | 0.9905 | pathogenic | -2.232 | Highly Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
L/P | 0.9639 | likely_pathogenic | 0.9712 | pathogenic | -1.595 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
L/Q | 0.9543 | likely_pathogenic | 0.9607 | pathogenic | -2.159 | Highly Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
L/R | 0.9429 | likely_pathogenic | 0.9522 | pathogenic | -1.584 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
L/S | 0.979 | likely_pathogenic | 0.9841 | pathogenic | -2.99 | Highly Destabilizing | 1.0 | D | 0.781 | deleterious | D | 0.665783459 | None | None | N |
L/T | 0.8727 | likely_pathogenic | 0.896 | pathogenic | -2.643 | Highly Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
L/V | 0.2949 | likely_benign | 0.3369 | benign | -1.595 | Destabilizing | 0.999 | D | 0.843 | deleterious | D | 0.588160102 | None | None | N |
L/W | 0.9528 | likely_pathogenic | 0.9628 | pathogenic | -2.078 | Highly Destabilizing | 1.0 | D | 0.681 | prob.neutral | D | 0.665783459 | None | None | N |
L/Y | 0.9753 | likely_pathogenic | 0.9801 | pathogenic | -1.812 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.