Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21139 | 63640;63641;63642 | chr2:178587992;178587991;178587990 | chr2:179452719;179452718;179452717 |
N2AB | 19498 | 58717;58718;58719 | chr2:178587992;178587991;178587990 | chr2:179452719;179452718;179452717 |
N2A | 18571 | 55936;55937;55938 | chr2:178587992;178587991;178587990 | chr2:179452719;179452718;179452717 |
N2B | 12074 | 36445;36446;36447 | chr2:178587992;178587991;178587990 | chr2:179452719;179452718;179452717 |
Novex-1 | 12199 | 36820;36821;36822 | chr2:178587992;178587991;178587990 | chr2:179452719;179452718;179452717 |
Novex-2 | 12266 | 37021;37022;37023 | chr2:178587992;178587991;178587990 | chr2:179452719;179452718;179452717 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | rs1576042907 | None | 0.669 | N | 0.389 | 0.092 | 0.146414634003 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1992 | likely_benign | 0.2011 | benign | -0.833 | Destabilizing | 0.688 | D | 0.369 | neutral | None | None | None | None | N |
Q/C | 0.479 | ambiguous | 0.4681 | ambiguous | -0.112 | Destabilizing | 0.998 | D | 0.533 | neutral | None | None | None | None | N |
Q/D | 0.407 | ambiguous | 0.372 | ambiguous | -1.111 | Destabilizing | 0.728 | D | 0.358 | neutral | None | None | None | None | N |
Q/E | 0.0848 | likely_benign | 0.0784 | benign | -0.933 | Destabilizing | 0.012 | N | 0.111 | neutral | N | 0.439807374 | None | None | N |
Q/F | 0.6705 | likely_pathogenic | 0.6564 | pathogenic | -0.28 | Destabilizing | 0.949 | D | 0.557 | neutral | None | None | None | None | N |
Q/G | 0.2847 | likely_benign | 0.2761 | benign | -1.265 | Destabilizing | 0.842 | D | 0.429 | neutral | None | None | None | None | N |
Q/H | 0.235 | likely_benign | 0.2275 | benign | -1.068 | Destabilizing | 0.966 | D | 0.43 | neutral | N | 0.470476998 | None | None | N |
Q/I | 0.2928 | likely_benign | 0.3018 | benign | 0.316 | Stabilizing | 0.728 | D | 0.497 | neutral | None | None | None | None | N |
Q/K | 0.0902 | likely_benign | 0.0913 | benign | -0.625 | Destabilizing | 0.051 | N | 0.149 | neutral | N | 0.430206456 | None | None | N |
Q/L | 0.1254 | likely_benign | 0.1304 | benign | 0.316 | Stabilizing | 0.005 | N | 0.169 | neutral | N | 0.449563008 | None | None | N |
Q/M | 0.2661 | likely_benign | 0.2687 | benign | 0.759 | Stabilizing | 0.949 | D | 0.444 | neutral | None | None | None | None | N |
Q/N | 0.3219 | likely_benign | 0.3065 | benign | -1.27 | Destabilizing | 0.842 | D | 0.433 | neutral | None | None | None | None | N |
Q/P | 0.7545 | likely_pathogenic | 0.7167 | pathogenic | -0.037 | Destabilizing | 0.966 | D | 0.493 | neutral | N | 0.486688336 | None | None | N |
Q/R | 0.0983 | likely_benign | 0.0974 | benign | -0.698 | Destabilizing | 0.669 | D | 0.389 | neutral | N | 0.454928756 | None | None | N |
Q/S | 0.2549 | likely_benign | 0.2419 | benign | -1.41 | Destabilizing | 0.842 | D | 0.314 | neutral | None | None | None | None | N |
Q/T | 0.1579 | likely_benign | 0.1567 | benign | -1.034 | Destabilizing | 0.842 | D | 0.397 | neutral | None | None | None | None | N |
Q/V | 0.1782 | likely_benign | 0.1835 | benign | -0.037 | Destabilizing | 0.728 | D | 0.399 | neutral | None | None | None | None | N |
Q/W | 0.5619 | ambiguous | 0.5465 | ambiguous | -0.25 | Destabilizing | 0.998 | D | 0.515 | neutral | None | None | None | None | N |
Q/Y | 0.4774 | ambiguous | 0.4585 | ambiguous | 0.01 | Stabilizing | 0.991 | D | 0.497 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.