Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21157 | 63694;63695;63696 | chr2:178587938;178587937;178587936 | chr2:179452665;179452664;179452663 |
N2AB | 19516 | 58771;58772;58773 | chr2:178587938;178587937;178587936 | chr2:179452665;179452664;179452663 |
N2A | 18589 | 55990;55991;55992 | chr2:178587938;178587937;178587936 | chr2:179452665;179452664;179452663 |
N2B | 12092 | 36499;36500;36501 | chr2:178587938;178587937;178587936 | chr2:179452665;179452664;179452663 |
Novex-1 | 12217 | 36874;36875;36876 | chr2:178587938;178587937;178587936 | chr2:179452665;179452664;179452663 |
Novex-2 | 12284 | 37075;37076;37077 | chr2:178587938;178587937;178587936 | chr2:179452665;179452664;179452663 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs1195739289 | None | 1.0 | N | 0.777 | 0.279 | 0.126345400529 | gnomAD-4.0.0 | 1.60837E-06 | None | None | None | None | N | None | 5.69476E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4 | ambiguous | 0.4035 | ambiguous | -0.906 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
A/D | 0.6971 | likely_pathogenic | 0.6702 | pathogenic | -2.069 | Highly Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
A/E | 0.552 | ambiguous | 0.5176 | ambiguous | -1.956 | Destabilizing | 1.0 | D | 0.744 | deleterious | N | 0.506077147 | None | None | N |
A/F | 0.559 | ambiguous | 0.5483 | ambiguous | -0.825 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
A/G | 0.1945 | likely_benign | 0.19 | benign | -1.495 | Destabilizing | 1.0 | D | 0.634 | neutral | N | 0.478255827 | None | None | N |
A/H | 0.7054 | likely_pathogenic | 0.6932 | pathogenic | -1.897 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
A/I | 0.3465 | ambiguous | 0.3391 | benign | -0.084 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
A/K | 0.7516 | likely_pathogenic | 0.7304 | pathogenic | -1.362 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
A/L | 0.2841 | likely_benign | 0.2882 | benign | -0.084 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
A/M | 0.2842 | likely_benign | 0.2884 | benign | -0.109 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
A/N | 0.53 | ambiguous | 0.5291 | ambiguous | -1.36 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
A/P | 0.9076 | likely_pathogenic | 0.9022 | pathogenic | -0.38 | Destabilizing | 1.0 | D | 0.77 | deleterious | N | 0.46740036 | None | None | N |
A/Q | 0.5186 | ambiguous | 0.5095 | ambiguous | -1.316 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
A/R | 0.6607 | likely_pathogenic | 0.62 | pathogenic | -1.243 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
A/S | 0.1238 | likely_benign | 0.1204 | benign | -1.727 | Destabilizing | 1.0 | D | 0.631 | neutral | N | 0.363879024 | None | None | N |
A/T | 0.1059 | likely_benign | 0.1033 | benign | -1.514 | Destabilizing | 1.0 | D | 0.777 | deleterious | N | 0.486008519 | None | None | N |
A/V | 0.1578 | likely_benign | 0.1518 | benign | -0.38 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | N | 0.480429341 | None | None | N |
A/W | 0.8746 | likely_pathogenic | 0.8654 | pathogenic | -1.506 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
A/Y | 0.6973 | likely_pathogenic | 0.6907 | pathogenic | -0.988 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.