Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21158 | 63697;63698;63699 | chr2:178587935;178587934;178587933 | chr2:179452662;179452661;179452660 |
N2AB | 19517 | 58774;58775;58776 | chr2:178587935;178587934;178587933 | chr2:179452662;179452661;179452660 |
N2A | 18590 | 55993;55994;55995 | chr2:178587935;178587934;178587933 | chr2:179452662;179452661;179452660 |
N2B | 12093 | 36502;36503;36504 | chr2:178587935;178587934;178587933 | chr2:179452662;179452661;179452660 |
Novex-1 | 12218 | 36877;36878;36879 | chr2:178587935;178587934;178587933 | chr2:179452662;179452661;179452660 |
Novex-2 | 12285 | 37078;37079;37080 | chr2:178587935;178587934;178587933 | chr2:179452662;179452661;179452660 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.842 | N | 0.503 | 0.19 | 0.251116650651 | gnomAD-4.0.0 | 1.37511E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.02757E-07 | 1.16995E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1302 | likely_benign | 0.1245 | benign | -0.188 | Destabilizing | 0.915 | D | 0.573 | neutral | N | 0.434718481 | None | None | N |
E/C | 0.6932 | likely_pathogenic | 0.687 | pathogenic | -0.165 | Destabilizing | 0.998 | D | 0.721 | deleterious | None | None | None | None | N |
E/D | 0.1554 | likely_benign | 0.1523 | benign | -0.93 | Destabilizing | 0.016 | N | 0.257 | neutral | N | 0.412033622 | None | None | N |
E/F | 0.5058 | ambiguous | 0.5006 | ambiguous | 0.777 | Stabilizing | 0.925 | D | 0.659 | prob.neutral | None | None | None | None | N |
E/G | 0.2007 | likely_benign | 0.1918 | benign | -0.602 | Destabilizing | 0.842 | D | 0.593 | neutral | N | 0.44797578 | None | None | N |
E/H | 0.3619 | ambiguous | 0.3561 | ambiguous | 0.747 | Stabilizing | 0.961 | D | 0.55 | neutral | None | None | None | None | N |
E/I | 0.2033 | likely_benign | 0.1947 | benign | 0.953 | Stabilizing | 0.981 | D | 0.685 | prob.delet. | None | None | None | None | N |
E/K | 0.1679 | likely_benign | 0.1598 | benign | -0.023 | Destabilizing | 0.842 | D | 0.503 | neutral | N | 0.449071858 | None | None | N |
E/L | 0.2349 | likely_benign | 0.2271 | benign | 0.953 | Stabilizing | 0.876 | D | 0.607 | neutral | None | None | None | None | N |
E/M | 0.291 | likely_benign | 0.285 | benign | 1.13 | Stabilizing | 0.998 | D | 0.663 | prob.neutral | None | None | None | None | N |
E/N | 0.2406 | likely_benign | 0.2333 | benign | -0.796 | Destabilizing | 0.087 | N | 0.334 | neutral | None | None | None | None | N |
E/P | 0.4098 | ambiguous | 0.3915 | ambiguous | 0.595 | Stabilizing | 0.994 | D | 0.636 | neutral | None | None | None | None | N |
E/Q | 0.1285 | likely_benign | 0.1258 | benign | -0.58 | Destabilizing | 0.915 | D | 0.545 | neutral | N | 0.450226651 | None | None | N |
E/R | 0.2605 | likely_benign | 0.2473 | benign | 0.335 | Stabilizing | 0.981 | D | 0.545 | neutral | None | None | None | None | N |
E/S | 0.1805 | likely_benign | 0.1761 | benign | -1.112 | Destabilizing | 0.876 | D | 0.506 | neutral | None | None | None | None | N |
E/T | 0.1625 | likely_benign | 0.1567 | benign | -0.737 | Destabilizing | 0.876 | D | 0.569 | neutral | None | None | None | None | N |
E/V | 0.1253 | likely_benign | 0.1187 | benign | 0.595 | Stabilizing | 0.842 | D | 0.578 | neutral | N | 0.467254974 | None | None | N |
E/W | 0.7976 | likely_pathogenic | 0.79 | pathogenic | 1.058 | Stabilizing | 0.998 | D | 0.693 | prob.delet. | None | None | None | None | N |
E/Y | 0.4465 | ambiguous | 0.4365 | ambiguous | 1.096 | Stabilizing | 0.087 | N | 0.434 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.