Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21161 | 63706;63707;63708 | chr2:178587926;178587925;178587924 | chr2:179452653;179452652;179452651 |
N2AB | 19520 | 58783;58784;58785 | chr2:178587926;178587925;178587924 | chr2:179452653;179452652;179452651 |
N2A | 18593 | 56002;56003;56004 | chr2:178587926;178587925;178587924 | chr2:179452653;179452652;179452651 |
N2B | 12096 | 36511;36512;36513 | chr2:178587926;178587925;178587924 | chr2:179452653;179452652;179452651 |
Novex-1 | 12221 | 36886;36887;36888 | chr2:178587926;178587925;178587924 | chr2:179452653;179452652;179452651 |
Novex-2 | 12288 | 37087;37088;37089 | chr2:178587926;178587925;178587924 | chr2:179452653;179452652;179452651 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs765979598 | None | 0.189 | N | 0.527 | 0.109 | 0.221734844693 | gnomAD-4.0.0 | 1.37998E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.05618E-07 | 0 | 1.6714E-05 |
E/K | rs753274370 | 0.718 | 0.189 | N | 0.609 | 0.146 | None | gnomAD-2.1.1 | 1.13E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.49E-05 | 0 |
E/K | rs753274370 | 0.718 | 0.189 | N | 0.609 | 0.146 | None | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
E/K | rs753274370 | 0.718 | 0.189 | N | 0.609 | 0.146 | None | gnomAD-4.0.0 | 2.99388E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.66393E-05 | 0 | 8.05932E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1167 | likely_benign | 0.1205 | benign | -0.022 | Destabilizing | 0.189 | N | 0.619 | neutral | N | 0.495225435 | None | None | N |
E/C | 0.6763 | likely_pathogenic | 0.7043 | pathogenic | -0.376 | Destabilizing | 0.962 | D | 0.785 | deleterious | None | None | None | None | N |
E/D | 0.0694 | likely_benign | 0.0726 | benign | -0.394 | Destabilizing | None | N | 0.165 | neutral | N | 0.420055673 | None | None | N |
E/F | 0.6119 | likely_pathogenic | 0.633 | pathogenic | -0.01 | Destabilizing | 0.962 | D | 0.761 | deleterious | None | None | None | None | N |
E/G | 0.0987 | likely_benign | 0.1005 | benign | -0.137 | Destabilizing | 0.189 | N | 0.527 | neutral | N | 0.451205299 | None | None | N |
E/H | 0.3698 | ambiguous | 0.3891 | ambiguous | 0.683 | Stabilizing | 0.892 | D | 0.617 | neutral | None | None | None | None | N |
E/I | 0.3059 | likely_benign | 0.3227 | benign | 0.228 | Stabilizing | 0.687 | D | 0.801 | deleterious | None | None | None | None | N |
E/K | 0.1779 | likely_benign | 0.1722 | benign | 0.329 | Stabilizing | 0.189 | N | 0.609 | neutral | N | 0.48435508 | None | None | N |
E/L | 0.3206 | likely_benign | 0.3388 | benign | 0.228 | Stabilizing | 0.519 | D | 0.77 | deleterious | None | None | None | None | N |
E/M | 0.3796 | ambiguous | 0.4062 | ambiguous | -0.104 | Destabilizing | 0.962 | D | 0.761 | deleterious | None | None | None | None | N |
E/N | 0.1532 | likely_benign | 0.1582 | benign | -0.002 | Destabilizing | 0.351 | N | 0.603 | neutral | None | None | None | None | N |
E/P | 0.4771 | ambiguous | 0.4781 | ambiguous | 0.162 | Stabilizing | 0.687 | D | 0.651 | prob.neutral | None | None | None | None | N |
E/Q | 0.1596 | likely_benign | 0.1637 | benign | 0.021 | Stabilizing | 0.449 | N | 0.597 | neutral | N | 0.48677931 | None | None | N |
E/R | 0.2961 | likely_benign | 0.2937 | benign | 0.63 | Stabilizing | 0.519 | D | 0.65 | prob.neutral | None | None | None | None | N |
E/S | 0.1505 | likely_benign | 0.1581 | benign | -0.12 | Destabilizing | 0.134 | N | 0.595 | neutral | None | None | None | None | N |
E/T | 0.1535 | likely_benign | 0.1642 | benign | -0.011 | Destabilizing | 0.519 | D | 0.575 | neutral | None | None | None | None | N |
E/V | 0.166 | likely_benign | 0.1733 | benign | 0.162 | Stabilizing | 0.623 | D | 0.721 | deleterious | N | 0.498033667 | None | None | N |
E/W | 0.8054 | likely_pathogenic | 0.8222 | pathogenic | 0.045 | Stabilizing | 0.962 | D | 0.781 | deleterious | None | None | None | None | N |
E/Y | 0.437 | ambiguous | 0.4598 | ambiguous | 0.211 | Stabilizing | 0.962 | D | 0.749 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.